BLASTX nr result

ID: Atractylodes21_contig00025784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025784
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519303.1| conserved hypothetical protein [Ricinus comm...   204   7e-50
ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   201   3e-49
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   199   2e-48
gb|AAO22731.1| unknown protein [Arabidopsis thaliana]                 197   5e-48
emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]           197   5e-48

>ref|XP_002519303.1| conserved hypothetical protein [Ricinus communis]
           gi|223541618|gb|EEF43167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  204 bits (518), Expect = 7e-50
 Identities = 110/160 (68%), Positives = 123/160 (76%)
 Frame = +3

Query: 366 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 545
           MDIISQLQEQV+TIA++AFNT GTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVDTIASLAFNTIGTLQRDAPPVRLSPNYPEPPA----------------- 43

Query: 546 XXXXXXXXESPNNNVSEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 725
                    +P  ++++QPKL+SA LVKAAKQFDALVAALPL+EGGEEAQLKRIAELQAE
Sbjct: 44  --------SNPAEDIADQPKLMSAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAE 95

Query: 726 NDLVGQELQKQLEAAEKELKQVQELFNEAADNCLNLKKPD 845
           ND VGQELQ+QLEAAEKELKQVQELF++A DNCLNLKKPD
Sbjct: 96  NDAVGQELQRQLEAAEKELKQVQELFSQATDNCLNLKKPD 135


>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  201 bits (512), Expect = 3e-49
 Identities = 111/160 (69%), Positives = 120/160 (75%)
 Frame = +3

Query: 366 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 545
           MDIISQLQEQVNTIAA+AFNTFGTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPT------------- 47

Query: 546 XXXXXXXXESPNNNVSEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 725
                      N  ++EQPKL+SA LVKAAKQFDALVAALPLS+GGEE QLKRIAELQAE
Sbjct: 48  ---------EDNATIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAE 98

Query: 726 NDLVGQELQKQLEAAEKELKQVQELFNEAADNCLNLKKPD 845
           ND+VGQELQKQL+AAEKEL QVQELF++ ADNCLNLKK D
Sbjct: 99  NDVVGQELQKQLQAAEKELVQVQELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  199 bits (506), Expect = 2e-48
 Identities = 110/160 (68%), Positives = 119/160 (74%)
 Frame = +3

Query: 366 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 545
           MDIISQLQEQVNTIAA+AFNTFGTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPT------------- 47

Query: 546 XXXXXXXXESPNNNVSEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 725
                      N  ++EQPKL+SA LVKAAKQFDALVAALPLS+GGEE QLKRIAELQAE
Sbjct: 48  ---------EDNATIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAE 98

Query: 726 NDLVGQELQKQLEAAEKELKQVQELFNEAADNCLNLKKPD 845
           ND+VGQELQKQL+AAEKEL QVQELF++ ADNCLNL K D
Sbjct: 99  NDVVGQELQKQLQAAEKELVQVQELFSQVADNCLNLMKAD 138


>gb|AAO22731.1| unknown protein [Arabidopsis thaliana]
          Length = 162

 Score =  197 bits (502), Expect = 5e-48
 Identities = 111/161 (68%), Positives = 116/161 (72%)
 Frame = +3

Query: 363 KMDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXX 542
           KMDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNY                     
Sbjct: 23  KMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFP---- 78

Query: 543 XXXXXXXXXESPNNNVSEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQA 722
                            EQPK LSA LVKAAKQFDALVAALPLSEGGE AQLKRIAELQ 
Sbjct: 79  -----------------EQPKQLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQV 121

Query: 723 ENDLVGQELQKQLEAAEKELKQVQELFNEAADNCLNLKKPD 845
           ENDLVGQELQKQLEAAEKELKQVQELF +AADNCLN+KKP+
Sbjct: 122 ENDLVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 162


>emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]
          Length = 381

 Score =  197 bits (502), Expect = 5e-48
 Identities = 111/161 (68%), Positives = 116/161 (72%)
 Frame = +3

Query: 363 KMDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXX 542
           KMDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNY                     
Sbjct: 242 KMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATPFP---- 297

Query: 543 XXXXXXXXXESPNNNVSEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQA 722
                            EQPK LSA LVKAAKQFDALVAALPLSEGGE AQLKRIAELQ 
Sbjct: 298 -----------------EQPKQLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQV 340

Query: 723 ENDLVGQELQKQLEAAEKELKQVQELFNEAADNCLNLKKPD 845
           ENDLVGQELQKQLEAAEKELKQVQELF +AADNCLN+KKP+
Sbjct: 341 ENDLVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 381


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