BLASTX nr result

ID: Atractylodes21_contig00025775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025775
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   205   3e-51
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   173   2e-41
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   169   2e-40
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   168   4e-40
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   168   4e-40

>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  205 bits (522), Expect = 3e-51
 Identities = 97/148 (65%), Positives = 122/148 (82%)
 Frame = -2

Query: 445  KKPVRYAGCVNACDTGSVAYALTVGENVGSDEPRSYKEAVSSKEASDWLLAMNEEMQSLE 266
            ++P+RY  CV+A  T  VA+AL V E +G +EPRSYKEA+ SK++  WL +M++EM SL 
Sbjct: 882  RRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLR 941

Query: 265  KNETWDLVQLPKGAKPVGCKWVFKRKEGIPGVESARFKARLVAKGFSQKEGIDYHEVFSP 86
            KN+TW+LV LP+G KPV CKW+FK K+GI   E  ++K+RLVAKGFSQKEGIDY+EVFSP
Sbjct: 942  KNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSP 1001

Query: 85   VVKHKTIRVLLAMVNAFNLELEQLDVKT 2
            VVKHK+IRVLLAMV+ FNLEL+QLDVKT
Sbjct: 1002 VVKHKSIRVLLAMVSVFNLELDQLDVKT 1029


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  173 bits (438), Expect = 2e-41
 Identities = 86/148 (58%), Positives = 110/148 (74%)
 Frame = -2

Query: 445  KKPVRYAGCVNACDTGSVAYALTVGENVGSDEPRSYKEAVSSKEASDWLLAMNEEMQSLE 266
            ++P+RY  CV+A  T  VA+AL V E +G +EPRSYKEA+ SK++  WL +M++EM SL 
Sbjct: 1095 RRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLR 1154

Query: 265  KNETWDLVQLPKGAKPVGCKWVFKRKEGIPGVESARFKARLVAKGFSQKEGIDYHEVFSP 86
            KN+TW+LV LP+G KPV CKW+FK K+GI   E  ++K+RLVAK            VFSP
Sbjct: 1155 KNQTWELVPLPEGVKPVDCKWLFKIKDGISEDEPPKYKSRLVAK------------VFSP 1202

Query: 85   VVKHKTIRVLLAMVNAFNLELEQLDVKT 2
            VVKHK+IRVLLAMV+ FNLEL+QLDVKT
Sbjct: 1203 VVKHKSIRVLLAMVSVFNLELDQLDVKT 1230


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/148 (58%), Positives = 107/148 (72%)
 Frame = -2

Query: 445  KKPVRYAGCVNACDTGSVAYALTVGENVGSDEPRSYKEAVSSKEASDWLLAMNEEMQSLE 266
            K P RY            A+AL+V E +   EP++Y+EA++S EA  W+ A+ EEM SL 
Sbjct: 745  KPPKRYG------QAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLR 798

Query: 265  KNETWDLVQLPKGAKPVGCKWVFKRKEGIPGVESARFKARLVAKGFSQKEGIDYHEVFSP 86
            KNETW+LV  PK  K VG KWVFKRK+G  G E+ R+KARLVAKGFSQKEG+DY+E+FSP
Sbjct: 799  KNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSP 858

Query: 85   VVKHKTIRVLLAMVNAFNLELEQLDVKT 2
            VVKH +IR+LLA V   +LEL+QLDVKT
Sbjct: 859  VVKHSSIRLLLAFVAHEDLELDQLDVKT 886


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/135 (59%), Positives = 103/135 (76%)
 Frame = -2

Query: 406  DTGSVAYALTVGENVGSDEPRSYKEAVSSKEASDWLLAMNEEMQSLEKNETWDLVQLPKG 227
            D   V +ALT+ E+    EP +Y+EA+ S E   W  A  EEM S++KN+TWD++  P+G
Sbjct: 804  DDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEG 863

Query: 226  AKPVGCKWVFKRKEGIPGVESARFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAM 47
             + +GCKW+FKRK GIPGVE  R+KARLVAKGFSQ+EGIDY E+FSPVVKH +IR LL++
Sbjct: 864  KRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSI 923

Query: 46   VNAFNLELEQLDVKT 2
            V  F++ELEQLDVKT
Sbjct: 924  VVQFDMELEQLDVKT 938


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/131 (60%), Positives = 101/131 (77%)
 Frame = -2

Query: 394  VAYALTVGENVGSDEPRSYKEAVSSKEASDWLLAMNEEMQSLEKNETWDLVQLPKGAKPV 215
            V YAL V E V + EP +YKEA+ S ++  W  AM +EM+SL KN+TWDLV  P G K +
Sbjct: 776  VGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKII 835

Query: 214  GCKWVFKRKEGIPGVESARFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAMVNAF 35
             CKWVFK+KEGI   E  ++KAR+VA+GF+Q+EG+DY+E+FSPVV+H +IRVLLA+V   
Sbjct: 836  TCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQ 895

Query: 34   NLELEQLDVKT 2
            NLELEQLDVKT
Sbjct: 896  NLELEQLDVKT 906


Top