BLASTX nr result

ID: Atractylodes21_contig00025706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025706
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    59   3e-07
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    56   3e-06
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    55   4e-06

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/112 (34%), Positives = 54/112 (48%)
 Frame = +3

Query: 3   IDITMVNFCDDDLLLYIADRSSQLRRLKIDCSYGDIYEGWIEAFKKFXXXXXXXXXXXXI 182
           ++I +  F  D+LL YIADRSS LR L++   Y    EG+IEA  K             +
Sbjct: 422 VEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGFIEAVVKLPLIEYLELSHCSL 481

Query: 183 SKEGIETAGRYCPMLKTLKVTQEAQRHSWVGATDMESIMIQNETAVAIGENL 338
           S E ++  G+ CP LKTLK+  E                  NE A+AI E++
Sbjct: 482 SGESLKVVGQSCPNLKTLKLNSEPD-------PKFNDDEFNNEEALAIAESM 526


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/112 (30%), Positives = 54/112 (48%)
 Frame = +3

Query: 3   IDITMVNFCDDDLLLYIADRSSQLRRLKIDCSYGDIYEGWIEAFKKFXXXXXXXXXXXXI 182
           + I + +F  D+LL YI DRSS +R L++   YG   +G  E  K+              
Sbjct: 95  LSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSEGIKRLPLLVEIDLCYCSF 154

Query: 183 SKEGIETAGRYCPMLKTLKVTQEAQRHSWVGATDMESIMIQNETAVAIGENL 338
           SKE +E  G+ CP LK+ ++  +  RH  +           +E A+AI +N+
Sbjct: 155 SKEVLEAIGQCCPRLKSFRLNCQGFRHPHIEC---------DEEALAIAQNM 197


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/110 (32%), Positives = 51/110 (46%)
 Frame = +3

Query: 3   IDITMVNFCDDDLLLYIADRSSQLRRLKIDCSYGDIYEGWIEAFKKFXXXXXXXXXXXXI 182
           IDI +  F  DDLL  IA+ +S L+RL++   +    EG  +A +KF            +
Sbjct: 98  IDINIEYFGTDDLLHRIANSASHLQRLRLASCWSISDEGLCDAAEKFPCLEELDISISNL 157

Query: 183 SKEGIETAGRYCPMLKTLKVTQEAQRHSWVGATDMESIMIQNETAVAIGE 332
           S    E  GR CP LKTLK   +  RH  +   D +     +  A AI +
Sbjct: 158 SDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNEAFAIAK 207


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