BLASTX nr result

ID: Atractylodes21_contig00025690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025690
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250...    52   4e-11
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu...    49   9e-11
ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    46   1e-10
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    48   4e-10
emb|CBI16568.3| unnamed protein product [Vitis vinifera]               52   1e-09

>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
           vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
           uncharacterized protein LOC100250148 isoform 2 [Vitis
           vinifera]
          Length = 368

 Score = 52.0 bits (123), Expect(2) = 4e-11
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = -3

Query: 349 EGSESTRYWCHECSREVETIAEAETIKCSLCHGGFVEELDSARS 218
           E +   RYWCH CS+ V  IAEAE  KC LC  GF+E++D   S
Sbjct: 2   EDAMGGRYWCHSCSQVVNPIAEAEP-KCPLCQDGFIEDIDGTAS 44



 Score = 40.4 bits (93), Expect(2) = 4e-11
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = -2

Query: 101 DSESDRALSLWAPILLGMMSNP 36
           D  SDR LSLWAPILLGMM NP
Sbjct: 53  DLASDRTLSLWAPILLGMMGNP 74


>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
           gi|223537345|gb|EEF38974.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 394

 Score = 49.3 bits (116), Expect(2) = 9e-11
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = -3

Query: 349 EGSESTRYWCHECSREVETIAEAETIKCSLCHGGFVEELDSARSD 215
           E + + RYWC+ CS+ V  I EAE IKC  C GGFVEE+ S   D
Sbjct: 2   EEALAARYWCYLCSQMVNPIMEAE-IKCPFCLGGFVEEMSSNTRD 45



 Score = 42.0 bits (97), Expect(2) = 9e-11
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -2

Query: 101 DSESDRALSLWAPILLGMMSNP 36
           D  SDRALSLWAP+LLGMM NP
Sbjct: 52  DFSSDRALSLWAPVLLGMMGNP 73


>ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 344

 Score = 46.2 bits (108), Expect(2) = 1e-10
 Identities = 23/33 (69%), Positives = 24/33 (72%)
 Frame = -2

Query: 101 DSESDRALSLWAPILLGMMSNPXXXXXXRQLEN 3
           D ESDRALSLWAPILLGMM NP      RQ+ N
Sbjct: 51  DFESDRALSLWAPILLGMMGNPRHPRRLRQIAN 83



 Score = 44.7 bits (104), Expect(2) = 1e-10
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = -3

Query: 337 STRYWCHECSREVETIAEAETIKCSLCHGGFVEELDSARS 218
           + RYWCH CS+ V  I + E I+C  C  GFVEE+ +  S
Sbjct: 2   AARYWCHMCSQMVNPIMDME-IRCPFCQSGFVEEMGNTPS 40


>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449519040|ref|XP_004166543.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 362

 Score = 48.1 bits (113), Expect(2) = 4e-10
 Identities = 21/40 (52%), Positives = 26/40 (65%)
 Frame = -3

Query: 337 STRYWCHECSREVETIAEAETIKCSLCHGGFVEELDSARS 218
           +TRYWCH CS+ V  I + E IKC  C  GFVEE+ +  S
Sbjct: 6   ATRYWCHMCSQMVNPIVDVE-IKCPFCRSGFVEEIGNGIS 44



 Score = 40.8 bits (94), Expect(2) = 4e-10
 Identities = 21/32 (65%), Positives = 22/32 (68%)
 Frame = -2

Query: 101 DSESDRALSLWAPILLGMMSNPXXXXXXRQLE 6
           D  S+RALSLWAPILLGMM NP      R LE
Sbjct: 63  DFGSERALSLWAPILLGMMGNPRGRRRFRHLE 94


>emb|CBI16568.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 52.0 bits (123), Expect(2) = 1e-09
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = -3

Query: 349 EGSESTRYWCHECSREVETIAEAETIKCSLCHGGFVEELDSARS 218
           E +   RYWCH CS+ V  IAEAE  KC LC  GF+E++D   S
Sbjct: 2   EDAMGGRYWCHSCSQVVNPIAEAEP-KCPLCQDGFIEDIDGTAS 44



 Score = 35.4 bits (80), Expect(2) = 1e-09
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -2

Query: 101 DSESDRALSLWAPILLGMM 45
           D  SDR LSLWAPILLGMM
Sbjct: 53  DLASDRTLSLWAPILLGMM 71


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