BLASTX nr result

ID: Atractylodes21_contig00025659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025659
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167746.1| PREDICTED: hippocampus abundant transcript 1...    61   1e-07
ref|XP_004144923.1| PREDICTED: tetracycline resistance protein, ...    61   1e-07
ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...    58   1e-06
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06

>ref|XP_004167746.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis
           sativus]
          Length = 434

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = +2

Query: 92  YYLKAEFHFGKDQFTNLMIINGIAGIISQMILMTMLLG-LSMKKFF---L*LGSHGTLLC 259
           YY KA FHF KDQF +LM++NG+AG +SQ++LM +L+  LS  K     L +GS GT++ 
Sbjct: 271 YYFKARFHFDKDQFADLMLLNGVAGTVSQLVLMPLLVPVLSEDKLLSLGLLVGSIGTVIN 330

Query: 260 CYLWA 274
              WA
Sbjct: 331 SIAWA 335


>ref|XP_004144923.1| PREDICTED: tetracycline resistance protein, class D-like [Cucumis
           sativus]
          Length = 448

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = +2

Query: 92  YYLKAEFHFGKDQFTNLMIINGIAGIISQMILMTMLLG-LSMKKFF---L*LGSHGTLLC 259
           YY KA FHF KDQF +LM++NG+AG +SQ++LM +L+  LS  K     L +GS GT++ 
Sbjct: 271 YYFKARFHFDKDQFADLMLLNGVAGTVSQLVLMPLLVPVLSEDKLLSLGLLVGSIGTVIN 330

Query: 260 CYLWA 274
              WA
Sbjct: 331 SIAWA 335


>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +2

Query: 62  SFVGFVCIL*YYLKAEFHFGKDQFTNLMIINGIAGIISQMILMTMLLGLSMKKFFL*LGS 241
           S VG    L YYLKA FHF K+QF +LM+I+GIAG ISQ++LM +L     +   L +G 
Sbjct: 255 SEVGLHASLMYYLKARFHFNKNQFADLMVISGIAGTISQLLLMPLLAPALGEARLLSVGL 314

Query: 242 HGTLLCCYLWA 274
             T +  +L++
Sbjct: 315 FFTCIHMFLYS 325


>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +2

Query: 68  VGFVCIL*YYLKAEFHFGKDQFTNLMIINGIAGIISQMILMTML 199
           VG    L YYLKA FHF KDQF +LM+I GIAG +SQ++LM +L
Sbjct: 262 VGLHASLLYYLKARFHFNKDQFADLMVITGIAGTLSQLVLMPIL 305


>ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|222843673|gb|EEE81220.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = +2

Query: 68  VGFVCIL*YYLKAEFHFGKDQFTNLMIINGIAGIISQMILMTML 199
           VG    L YYLKA+FHF KDQF  LM+I+GIAG +SQ+++M +L
Sbjct: 240 VGLHASLMYYLKAQFHFSKDQFAVLMVISGIAGTVSQLVIMPLL 283


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