BLASTX nr result

ID: Atractylodes21_contig00025646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025646
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004222321.1| hypothetical protein BevumaM_p086 [Beta vulg...   189   3e-46
dbj|BAF01911.1| NADH dehydrogenase subunit 4 [Arabidopsis thaliana]   183   2e-44
ref|XP_002455684.1| hypothetical protein SORBIDRAFT_03g020225 [S...   182   5e-44
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...   178   7e-43
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   165   9e-41

>ref|YP_004222321.1| hypothetical protein BevumaM_p086 [Beta vulgaris subsp. maritima]
           gi|346683194|ref|YP_004842127.1| hypothetical protein
           BemaM_p082 [Beta macrocarpa]
           gi|317905654|emb|CBX33230.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439836|emb|CBX33303.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148084|emb|CBJ20746.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500112|emb|CBX24930.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939142|emb|CBL51989.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 175

 Score =  189 bits (481), Expect = 3e-46
 Identities = 93/102 (91%), Positives = 94/102 (92%)
 Frame = -3

Query: 672 WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAV 493
           WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYI A LI EFLMIAV
Sbjct: 74  WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAV 133

Query: 492 FCMLDLLLFYVFFESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 367
           FCMLDLLLFYV  ESV IPMLCGAEHL+FA IKLFLCRGL Q
Sbjct: 134 FCMLDLLLFYVLSESVPIPMLCGAEHLLFARIKLFLCRGLVQ 175


>dbj|BAF01911.1| NADH dehydrogenase subunit 4 [Arabidopsis thaliana]
          Length = 175

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/102 (90%), Positives = 94/102 (92%)
 Frame = -3

Query: 672 WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAV 493
           WLPYENI+FYLGIDGISLFFVILTTFLIPICI VGWSGMRSYGKEYI AFLI EFLMIAV
Sbjct: 74  WLPYENINFYLGIDGISLFFVILTTFLIPICISVGWSGMRSYGKEYITAFLIREFLMIAV 133

Query: 492 FCMLDLLLFYVFFESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 367
           F MLDLLLFYVF ESV IPMLCGAE+LIFAG KLFLCRGL Q
Sbjct: 134 FRMLDLLLFYVFPESVPIPMLCGAEYLIFAGRKLFLCRGLVQ 175


>ref|XP_002455684.1| hypothetical protein SORBIDRAFT_03g020225 [Sorghum bicolor]
           gi|241927659|gb|EES00804.1| hypothetical protein
           SORBIDRAFT_03g020225 [Sorghum bicolor]
          Length = 152

 Score =  182 bits (462), Expect = 5e-44
 Identities = 88/102 (86%), Positives = 92/102 (90%)
 Frame = -3

Query: 672 WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAV 493
           WLPYENIH Y+GIDG+SLFFVILTTFLIPICI VGWSGMRS+GKEYI AFLI EFLMIAV
Sbjct: 51  WLPYENIHLYMGIDGLSLFFVILTTFLIPICISVGWSGMRSFGKEYITAFLIREFLMIAV 110

Query: 492 FCMLDLLLFYVFFESVLIPMLCGAEHLIFAGIKLFLCRGLAQ 367
            CMLD LLFYV  ESV IPMLCGAEHL+FAGIKLFLCRGL Q
Sbjct: 111 SCMLDPLLFYVLSESVPIPMLCGAEHLLFAGIKLFLCRGLVQ 152


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score =  178 bits (452), Expect = 7e-43
 Identities = 88/100 (88%), Positives = 92/100 (92%)
 Frame = -3

Query: 672 WLPYENIHFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAV 493
           WLPYENI+F+LGIDG+S FFVILTTFLIPICILVGWSGMRSYGKEYI A LI EFLMIAV
Sbjct: 74  WLPYENINFHLGIDGLSFFFVILTTFLIPICILVGWSGMRSYGKEYITASLIREFLMIAV 133

Query: 492 FCMLDLLLFYVFFESVLIPMLCGAEHLIFAGIKLFLCRGL 373
           F MLD LLFYV  ESVLIPMLCGAEHL+FAGIKLFLCRGL
Sbjct: 134 FRMLDPLLFYVLPESVLIPMLCGAEHLLFAGIKLFLCRGL 173



 Score =  115 bits (287), Expect = 1e-23
 Identities = 55/56 (98%), Positives = 55/56 (98%)
 Frame = -1

Query: 176 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIRVTATREKKK 9
           TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIRVTATREK K
Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIRVTATREKSK 230


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  165 bits (418), Expect(2) = 9e-41
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = +2

Query: 128 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 307
           APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS
Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 264

Query: 308 SRKLRGDYFTTTDDRP 355
           SRKLRGDYFTTTDDRP
Sbjct: 265 SRKLRGDYFTTTDDRP 280



 Score = 27.7 bits (60), Expect(2) = 9e-41
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +1

Query: 4   FGFFFSLVAVTRIRASVSTP 63
           F F FSLVAVTRIRA    P
Sbjct: 189 FPFDFSLVAVTRIRARAPLP 208


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