BLASTX nr result

ID: Atractylodes21_contig00025627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025627
         (2071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi...   120   2e-24
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   118   5e-24
ref|XP_002531375.1| RNA and export factor binding protein, putat...   117   9e-24
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]   117   2e-23
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...   116   3e-23

>ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi|355507709|gb|AES88851.1|
            THO complex subunit [Medicago truncatula]
          Length = 376

 Score =  120 bits (300), Expect = 2e-24
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = -1

Query: 2071 FAEVGDLKKYSVHYDRSGRSKGTAEVVFSGWQDALSAIKRYNNVLLDGKPMQIEIVGTNI 1892
            F+EVGDLK++ VHYDRSGRSKGTAEVVFS  QDA++A+KRYNNV LDGKPM+IEIVGTNI
Sbjct: 227  FSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNI 286

Query: 1891 VTPPGSCPLLNKSIVNMNGFPR 1826
             T PG+ P++N  I N NG P+
Sbjct: 287  ST-PGAAPVVNAPIGNFNGIPQ 307


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  118 bits (296), Expect = 5e-24
 Identities = 61/82 (74%), Positives = 68/82 (82%)
 Frame = -1

Query: 2071 FAEVGDLKKYSVHYDRSGRSKGTAEVVFSGWQDALSAIKRYNNVLLDGKPMQIEIVGTNI 1892
            FAEVGDLK+++VHYDRSGRSKGTAEVVFS   DA+SA+KRYNNV LDGKPM+IEIVGTNI
Sbjct: 109  FAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNI 168

Query: 1891 VTPPGSCPLLNKSIVNMNGFPR 1826
             T PG  P  N +I N NG PR
Sbjct: 169  ST-PGVAPAPNGAIGNFNGVPR 189


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223529035|gb|EEF31023.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 247

 Score =  117 bits (294), Expect = 9e-24
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -1

Query: 2071 FAEVGDLKKYSVHYDRSGRSKGTAEVVFSGWQDALSAIKRYNNVLLDGKPMQIEIVGTNI 1892
            F+EVGDLK+YS+HYDRSGRSKGTAEVVFS   DAL+A+KRYNNV LDGKPM+IEIVGTNI
Sbjct: 111  FSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNI 170

Query: 1891 VTPPGSCPLLNKSIVNMNGFPR 1826
             T P + P  N +  N NG PR
Sbjct: 171  AT-PAATPAANGNFGNSNGAPR 191


>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
          Length = 281

 Score =  117 bits (292), Expect = 2e-23
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -1

Query: 2071 FAEVGDLKKYSVHYDRSGRSKGTAEVVFSGWQDALSAIKRYNNVLLDGKPMQIEIVGTNI 1892
            F+EVGDLK+YS+HYDRSGRSKGTAEVVFS   DA++A+KRYNNV LDGKPM+IEIVGTNI
Sbjct: 107  FSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNI 166

Query: 1891 VTPPGSCPLLNKSIVNMNGFPRR 1823
             TP    P+ N +  N NG  RR
Sbjct: 167  ATPAAVPPVTNGTFGNSNGGLRR 189


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
            sativus]
          Length = 237

 Score =  116 bits (290), Expect = 3e-23
 Identities = 58/82 (70%), Positives = 68/82 (82%)
 Frame = -1

Query: 2071 FAEVGDLKKYSVHYDRSGRSKGTAEVVFSGWQDALSAIKRYNNVLLDGKPMQIEIVGTNI 1892
            F+EVGD+K+YS++YD+SGRSKGTAE+VFS   DAL+AIKRYNNV LDGKPM++EIVGTNI
Sbjct: 107  FSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNI 166

Query: 1891 VTPPGSCPLLNKSIVNMNGFPR 1826
            VTP    P  N S  N NGFPR
Sbjct: 167  VTPAVPAP-SNASFGNPNGFPR 187


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