BLASTX nr result

ID: Atractylodes21_contig00025532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025532
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   162   4e-38
ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  162 bits (409), Expect = 4e-38
 Identities = 75/112 (66%), Positives = 92/112 (82%)
 Frame = -2

Query: 522 EFVQIHEKLKELFAKIKELGYVPDTTNVLHDVEDEQKEDYVGYHSEKLAVAYALLRTHEK 343
           E +QI++K+++L A IK LGYVP+  +VLHDVEDEQKE Y+ YHSEKLA+AY L++    
Sbjct: 583 ESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSP 642

Query: 342 APICIIKNLRICDDCHFAMKLISKVTQRLIHVRDVNRFHSFQDGSCSCADYW 187
           API IIKNLR+CDDCH A+KLISKVT RLI VRD NRFH F+DGSC+C D+W
Sbjct: 643 APIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694


>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/108 (67%), Positives = 87/108 (80%)
 Frame = -2

Query: 510 IHEKLKELFAKIKELGYVPDTTNVLHDVEDEQKEDYVGYHSEKLAVAYALLRTHEKAPIC 331
           I+E +K+L +KI+ LGYVPD  NVLHD+EDEQK D + YHSEKLAVAY L++T   API 
Sbjct: 590 IYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIT 649

Query: 330 IIKNLRICDDCHFAMKLISKVTQRLIHVRDVNRFHSFQDGSCSCADYW 187
           +IKNLR+CDDCH A+KLISKV  R+I VRD NRFH FQ+G CSC DYW
Sbjct: 650 VIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697


>ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like, partial [Cucumis sativus]
          Length = 390

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/108 (67%), Positives = 87/108 (80%)
 Frame = -2

Query: 510 IHEKLKELFAKIKELGYVPDTTNVLHDVEDEQKEDYVGYHSEKLAVAYALLRTHEKAPIC 331
           I+E +K+L +KI+ LGYVPD  NVLHD+EDEQK D + YHSEKLAVAY L++T   API 
Sbjct: 283 IYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIR 342

Query: 330 IIKNLRICDDCHFAMKLISKVTQRLIHVRDVNRFHSFQDGSCSCADYW 187
           +IKNLR+CDDCH A+KLISKV  R+I VRD NRFH FQ+G CSC DYW
Sbjct: 343 VIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGYCSCGDYW 390


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  159 bits (402), Expect = 2e-37
 Identities = 73/109 (66%), Positives = 86/109 (78%)
 Frame = -2

Query: 513 QIHEKLKELFAKIKELGYVPDTTNVLHDVEDEQKEDYVGYHSEKLAVAYALLRTHEKAPI 334
           QI+EK++EL   I+ +GYVPD   V HDVEDEQK +YV YHSEKLA+AY L++T   API
Sbjct: 595 QIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPI 654

Query: 333 CIIKNLRICDDCHFAMKLISKVTQRLIHVRDVNRFHSFQDGSCSCADYW 187
            +IKNLR+C DCH A+KLISKVT R+I VRD NRFH F DG CSCADYW
Sbjct: 655 RVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/112 (66%), Positives = 88/112 (78%)
 Frame = -2

Query: 522 EFVQIHEKLKELFAKIKELGYVPDTTNVLHDVEDEQKEDYVGYHSEKLAVAYALLRTHEK 343
           ++ Q ++K+KEL A IK LGY PD   VLHDVEDEQKE Y+ YHSEKLA+AY LL+   +
Sbjct: 596 DYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSE 655

Query: 342 APICIIKNLRICDDCHFAMKLISKVTQRLIHVRDVNRFHSFQDGSCSCADYW 187
           A I +IKNLRICDDCH A++LISKVT R+I VRD NRFH F+DG CSC DYW
Sbjct: 656 ASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707


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