BLASTX nr result

ID: Atractylodes21_contig00025456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025456
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271997.1| PREDICTED: TVP38/TMEM64 family membrane prot...   147   1e-33
ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...   145   7e-33
ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|2...   129   4e-28
ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane prot...   127   1e-27
ref|NP_197408.2| SNARE associated Golgi family protein [Arabidop...   127   2e-27

>ref|XP_002271997.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Vitis
           vinifera]
          Length = 373

 Score =  147 bits (371), Expect = 1e-33
 Identities = 76/124 (61%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = -2

Query: 370 INLANAVGLRARSSLKQDLTNE-DDEDFRPWRRRLLSSMKMKVSFSFTWSSAVRASIFLI 194
           +NLAN   LRARSSLKQ+  N  D ED  PWRRRL S           W S+ R ++ L+
Sbjct: 66  LNLANVGRLRARSSLKQENANGIDAEDSSPWRRRLSS---------MAWPSSFRMALLLL 116

Query: 193 LLAVFAFACFSLPVEKILKDFLLWIKTELGPWGPLVLAIAYIPLTVFAVPASVLTLGGGY 14
             A  + AC +LP+EKILK FLLWIK +LGPWGPLVLA+AYIPLTV AVPAS+LT+GGGY
Sbjct: 117 FFAAISTACLTLPIEKILKGFLLWIKRDLGPWGPLVLAVAYIPLTVLAVPASILTIGGGY 176

Query: 13  LFGL 2
           LFGL
Sbjct: 177 LFGL 180


>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
           gi|223543789|gb|EEF45317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  145 bits (365), Expect = 7e-33
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 2/111 (1%)
 Frame = -2

Query: 328 LKQDLTNEDD--EDFRPWRRRLLSSMKMKVSFSFTWSSAVRASIFLILLAVFAFACFSLP 155
           LKQ ++  +D  E+ RPWRR+L S+M      S TW SA+R ++  +L+A    ACF+LP
Sbjct: 3   LKQSISEYEDNEEECRPWRRKLSSTMA-----SMTWGSALRITLLFLLIAAVVVACFTLP 57

Query: 154 VEKILKDFLLWIKTELGPWGPLVLAIAYIPLTVFAVPASVLTLGGGYLFGL 2
           VEKILKDFLLW++ +LGPWGPLVLA+AYIPLTV AVPASVLTLGGGYLFGL
Sbjct: 58  VEKILKDFLLWVEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGL 108


>ref|XP_002311831.1| predicted protein [Populus trichocarpa] gi|222851651|gb|EEE89198.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  129 bits (324), Expect = 4e-28
 Identities = 60/79 (75%), Positives = 71/79 (89%)
 Frame = -2

Query: 238 SFTWSSAVRASIFLILLAVFAFACFSLPVEKILKDFLLWIKTELGPWGPLVLAIAYIPLT 59
           SF+W+S +R +IFL+L+A   FA F+LPVEKILKDFLLW++ +LGPWGPLVLAIAYIPLT
Sbjct: 3   SFSWASLLRITIFLLLVAAAVFAFFTLPVEKILKDFLLWVEQDLGPWGPLVLAIAYIPLT 62

Query: 58  VFAVPASVLTLGGGYLFGL 2
           + AVPASVLTLGGGYLFGL
Sbjct: 63  ILAVPASVLTLGGGYLFGL 81


>ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like
           [Glycine max]
          Length = 274

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/79 (73%), Positives = 69/79 (87%)
 Frame = -2

Query: 238 SFTWSSAVRASIFLILLAVFAFACFSLPVEKILKDFLLWIKTELGPWGPLVLAIAYIPLT 59
           SF+WSS +R +I L+LLA    ACF+LP+EK++KDFLLW+  +LGPWGPLVLA+AYIPLT
Sbjct: 2   SFSWSSTLRITILLLLLAAVIVACFTLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPLT 61

Query: 58  VFAVPASVLTLGGGYLFGL 2
           V AVPASVLTLGGGYLFGL
Sbjct: 62  VLAVPASVLTLGGGYLFGL 80


>ref|NP_197408.2| SNARE associated Golgi family protein [Arabidopsis thaliana]
           gi|50201959|gb|AAT70495.1| At5g19070 [Arabidopsis
           thaliana] gi|58331785|gb|AAW70390.1| At5g19070
           [Arabidopsis thaliana] gi|110737737|dbj|BAF00807.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005265|gb|AED92648.1| SNARE associated Golgi
           family protein [Arabidopsis thaliana]
          Length = 280

 Score =  127 bits (318), Expect = 2e-27
 Identities = 57/79 (72%), Positives = 67/79 (84%)
 Frame = -2

Query: 238 SFTWSSAVRASIFLILLAVFAFACFSLPVEKILKDFLLWIKTELGPWGPLVLAIAYIPLT 59
           +FTW SA+R S+ LIL+A    AC+ LPVEK+LKDFLLW++ +LGPWGP  LA+AYIPLT
Sbjct: 2   AFTWGSALRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALAVAYIPLT 61

Query: 58  VFAVPASVLTLGGGYLFGL 2
           V AVPASVLTLGGGYLFGL
Sbjct: 62  VLAVPASVLTLGGGYLFGL 80


Top