BLASTX nr result

ID: Atractylodes21_contig00025444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025444
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   348   1e-93
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   337   2e-90
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   333   2e-89
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   332   8e-89
ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ...   329   4e-88

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  348 bits (892), Expect = 1e-93
 Identities = 187/275 (68%), Positives = 217/275 (78%), Gaps = 7/275 (2%)
 Frame = -2

Query: 806  SSSTREFCNRKPLAGSLVVCPASLLRQWARELDEKVADEARLEVLMYHGGNRTKDPAELA 627
            S+S  EF  R+P AG+LVVCPAS+LRQWARELDEKV++EA+L V +YHGG+RTKDP ELA
Sbjct: 383  SASLPEFRRRRPAAGTLVVCPASVLRQWARELDEKVSEEAKLSVCLYHGGSRTKDPVELA 442

Query: 626  KYDVVLTTYSIVAKEVPNKTF--GEXXXXXXXXXXGLSSEFS-NKKRKQ-SHVSKIGKKG 459
            KYDVVLTTYSIV  EVP +     +          GLSSEFS NKKRK+ S+VSK GKKG
Sbjct: 443  KYDVVLTTYSIVTNEVPKQPLVDDDEGDERNGEKYGLSSEFSVNKKRKKPSNVSKRGKKG 502

Query: 458  RKGMESSEIDCS-GTLAKVHWFRVILDEAQTIKNSDTQVARSCCGLRAKKRWCLSGTPVQ 282
            RKG++SS ID   G LA+V WFRVILDEAQTIKN  TQVAR+CC LRAK+RWCLSGTP+Q
Sbjct: 503  RKGIDSSSIDYDCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQ 562

Query: 281  NSINELFSYFRFLKCEPYTKYNSFRNQIKIPISRNSIEGYVELQAVLRAIMLRRTKDTLI 102
            N+I++L+SYFRFLK +PY  Y SF N IK+PISRNS+ GY +LQAVLRAIMLRRTK TLI
Sbjct: 563  NAIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISRNSVHGYKKLQAVLRAIMLRRTKGTLI 622

Query: 101  GGKPIINLPLKT--MDSVDSSPKERAFYRKLEPES 3
             G PIINLP KT  +  VD S +ERAFY KLE +S
Sbjct: 623  DGTPIINLPPKTICLSKVDFSSEERAFYSKLEADS 657


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853265|gb|EEE90812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 923

 Score =  337 bits (864), Expect = 2e-90
 Identities = 180/276 (65%), Positives = 214/276 (77%), Gaps = 7/276 (2%)
 Frame = -2

Query: 809  SSSSTREFCNRKPLAGSLVVCPASLLRQWARELDEKVADEARLEVLMYHGGNRTKDPAEL 630
            + SST+    R+P AG+LVVCPAS+LRQWARELD+KVAD A+L VL+YHGGNRT+ P EL
Sbjct: 296  AGSSTKAISRRRPAAGTLVVCPASVLRQWARELDDKVADGAKLSVLIYHGGNRTRSPDEL 355

Query: 629  AKYDVVLTTYSIVAKEVPNKTF--GEXXXXXXXXXXGLSSEFSN--KKRKQSHVSKIGKK 462
            AK+DVVLTTYSIV  EVP +     +          GLSSEFSN  K++K S VSK  K+
Sbjct: 356  AKHDVVLTTYSIVTNEVPKQPLVDEDEADDKNGEKHGLSSEFSNNKKRKKTSKVSK--KR 413

Query: 461  GRKGMESSEIDCS-GTLAKVHWFRVILDEAQTIKNSDTQVARSCCGLRAKKRWCLSGTPV 285
            GRKGM+SS IDC  G LA+V W RVILDEAQTIKN  TQVAR+CC LRAK+RWCLSGTP+
Sbjct: 414  GRKGMDSSSIDCDFGALARVSWSRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPI 473

Query: 284  QNSINELFSYFRFLKCEPYTKYNSFRNQIKIPISRNSIEGYVELQAVLRAIMLRRTKDTL 105
            QNSI++L+SYFRFL+ +PY  Y SF N IK+PISRNS+ GY +LQAVLRAIMLRRTK TL
Sbjct: 474  QNSIDDLYSYFRFLRYDPYAVYKSFYNTIKVPISRNSLHGYKKLQAVLRAIMLRRTKATL 533

Query: 104  IGGKPIINLPLKT--MDSVDSSPKERAFYRKLEPES 3
            I G+PIINLP K+  +  VD S +ERAFY +LE +S
Sbjct: 534  IDGQPIINLPPKSICLTKVDFSTEERAFYTRLEADS 569


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  333 bits (855), Expect = 2e-89
 Identities = 179/275 (65%), Positives = 214/275 (77%), Gaps = 7/275 (2%)
 Frame = -2

Query: 806  SSSTREFCNRKPLAGSLVVCPASLLRQWARELDEKVADEARLEVLMYHGGNRTKDPAELA 627
            SSST+    ++P AG+LVVCPAS+LRQWARELDEKV DE +L VL+YHGG+RTKDP ELA
Sbjct: 373  SSSTQAPGRKRPAAGTLVVCPASVLRQWARELDEKVGDE-KLSVLVYHGGSRTKDPVELA 431

Query: 626  KYDVVLTTYSIVAKEVPNKTFGEXXXXXXXXXXG--LSSEFS--NKKRKQSHVSKIGKKG 459
            K+DVVLTTYSIV  EVP +   E             LSSEFS   K++K  + +K  KKG
Sbjct: 432  KFDVVLTTYSIVTNEVPKQPLVEEDDIDEKMGERFGLSSEFSVSKKRKKPFNGNKKSKKG 491

Query: 458  RKGMESSEIDC-SGTLAKVHWFRVILDEAQTIKNSDTQVARSCCGLRAKKRWCLSGTPVQ 282
             KG++SS I+C SG LAKV WFRVILDEAQTIKN  TQVAR+CC LRAK+RWCLSGTP+Q
Sbjct: 492  GKGIDSSSIECGSGPLAKVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQ 551

Query: 281  NSINELFSYFRFLKCEPYTKYNSFRNQIKIPISRNSIEGYVELQAVLRAIMLRRTKDTLI 102
            N+I++L+SYFRFLK +PY  Y SF N IK+PIS+N+I+GY +LQAVLRAIMLRRTK TL+
Sbjct: 552  NTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISKNTIQGYKKLQAVLRAIMLRRTKGTLL 611

Query: 101  GGKPIINLPLKTMD--SVDSSPKERAFYRKLEPES 3
             GKPIINLP KT++   VD S +ERAFY KLE +S
Sbjct: 612  DGKPIINLPPKTIELSKVDFSIEERAFYTKLESDS 646


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Glycine max]
          Length = 975

 Score =  332 bits (850), Expect = 8e-89
 Identities = 178/275 (64%), Positives = 214/275 (77%), Gaps = 7/275 (2%)
 Frame = -2

Query: 806  SSSTREFCNRKPLAGSLVVCPASLLRQWARELDEKVADEARLEVLMYHGGNRTKDPAELA 627
            SSST+    ++P AG+LVVCPAS+LRQWARELDEKV DE +L VL+YHGG+RTKDP ELA
Sbjct: 340  SSSTQAPGRKRPAAGTLVVCPASVLRQWARELDEKVGDE-KLSVLVYHGGSRTKDPVELA 398

Query: 626  KYDVVLTTYSIVAKEVPNKTFGEXXXXXXXXXXG--LSSEFS--NKKRKQSHVSKIGKKG 459
            K+DVVLTTYSIV  EVP +   E             LSSEFS   K++K  + +K  KKG
Sbjct: 399  KFDVVLTTYSIVTNEVPKQPLVEDDDIDGKNGERFGLSSEFSVSKKRKKPFNGNKKSKKG 458

Query: 458  RKGMESSEIDC-SGTLAKVHWFRVILDEAQTIKNSDTQVARSCCGLRAKKRWCLSGTPVQ 282
             KG++SS I+C SG LAKV WFRVILDEAQTIKN  TQVAR+CC LRAK+RWCLSGTP+Q
Sbjct: 459  GKGIDSSSIECGSGPLAKVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQ 518

Query: 281  NSINELFSYFRFLKCEPYTKYNSFRNQIKIPISRNSIEGYVELQAVLRAIMLRRTKDTLI 102
            N+I++L+SYFRFLK +PY  Y SF N IK+PIS+++I+GY +LQAVLRAIMLRRTK TL+
Sbjct: 519  NTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISKSTIQGYKKLQAVLRAIMLRRTKGTLL 578

Query: 101  GGKPIINLPLKTMD--SVDSSPKERAFYRKLEPES 3
             GKPIINLP KT++   VD S +ERAFY KLE +S
Sbjct: 579  DGKPIINLPPKTIELSKVDFSIEERAFYTKLESDS 613


>ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337416|gb|EFH67833.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 980

 Score =  329 bits (844), Expect = 4e-88
 Identities = 176/277 (63%), Positives = 213/277 (76%), Gaps = 8/277 (2%)
 Frame = -2

Query: 809  SSSSTREFCNRKPLAGSLVVCPASLLRQWARELDEKVADEARLEVLMYHGGNRTKDPAEL 630
            +S+STR+F   +P AG+L+VCPAS++RQWARELDEKV DEA+L VL+YHGGNRTKDP EL
Sbjct: 329  ASTSTRKFNRMRPAAGTLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIEL 388

Query: 629  AKYDVVLTTYSIVAKEVPNKTF--GEXXXXXXXXXXGLSSEFS-NKKRKQ--SHVSKIGK 465
            AKYDVV+TTY+IV+ EVP +     +          GL+S FS NKKRK       K  K
Sbjct: 389  AKYDVVMTTYAIVSNEVPKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKK 448

Query: 464  KGRKGMESSEIDC-SGTLAKVHWFRVILDEAQTIKNSDTQVARSCCGLRAKKRWCLSGTP 288
            KG+   + S  D  SGTLAKV WFRV+LDEAQTIKN  TQVAR+CCGLRAK+RWCLSGTP
Sbjct: 449  KGKNNADDSSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTP 508

Query: 287  VQNSINELFSYFRFLKCEPYTKYNSFRNQIKIPISRNSIEGYVELQAVLRAIMLRRTKDT 108
            +QN+I++L+SYFRFLK +PY  Y SF +QIK PISRNS+ GY +LQAVLRAIMLRRTK T
Sbjct: 509  IQNTIDDLYSYFRFLKYDPYAVYKSFCHQIKGPISRNSLHGYKKLQAVLRAIMLRRTKGT 568

Query: 107  LIGGKPIINLPLKTMD--SVDSSPKERAFYRKLEPES 3
            L+ G+PIINLP KT++   VD S +ER+FY KLE +S
Sbjct: 569  LLDGQPIINLPPKTINLIKVDFSVEERSFYMKLESDS 605


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