BLASTX nr result

ID: Atractylodes21_contig00025437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025437
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   596   e-168
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   585   e-165
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
gb|AFK37872.1| unknown [Lotus japonicus]                              585   e-164
ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li...   581   e-163

>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
            gi|296089274|emb|CBI39046.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  596 bits (1536), Expect = e-168
 Identities = 296/354 (83%), Positives = 309/354 (87%)
 Frame = +1

Query: 67   MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 246
            MLWVDKYRPKTLD ++VH+DVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMA+LRQMFG
Sbjct: 1    MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60

Query: 247  PGAXXXXXXXXXXXXDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 426
            P A            DAG+RTIDLELTTLSSTHH+ELNP DAGFQDRYIVQEIIKEMAKN
Sbjct: 61   PSADKVKVENKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKN 120

Query: 427  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 606
            RPIDTKGKKGF+VLVLNEVD+LSREAQHSLRRTMEKYSASCRLILCC+SSSKVTEAVRSR
Sbjct: 121  RPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180

Query: 607  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY 786
            CLN+RINAP EEQI KVLEFI KKEGLQLP GFA RIAEKS RSLRRAILSFETCRVQQY
Sbjct: 181  CLNIRINAPTEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQY 240

Query: 787  PFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPXXXXXXXXXX 966
            PFTNNQ +PPMDWEEYV+EIASDIMKEQSPKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLE 300

Query: 967  XXXXXXXXXXXXVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 1128
                        VCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYK FLIATFG
Sbjct: 301  LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
            gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  585 bits (1508), Expect = e-165
 Identities = 288/354 (81%), Positives = 310/354 (87%)
 Frame = +1

Query: 67   MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 246
            MLWVDKYRPKTLD+V+VH D+A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 247  PGAXXXXXXXXXXXXDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 426
            PGA            DAGSR++DLELTTLSS +H+E++PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 427  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 606
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCC+SSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 607  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY 786
            CLNVRINAP EEQIV+VLEFIGKKEGLQLPPGFAARI EKS R+LRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY 240

Query: 787  PFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPXXXXXXXXXX 966
            PFTN Q IPPMDWEEY++EIASDIMKEQSPKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300

Query: 967  XXXXXXXXXXXXVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 1128
                        VCHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYK FLI+TFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG 354


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  585 bits (1508), Expect = e-165
 Identities = 292/354 (82%), Positives = 312/354 (88%)
 Frame = +1

Query: 67   MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 246
            MLWVDKYRPKTLD+V+VH+++A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQ+FG
Sbjct: 1    MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60

Query: 247  PGAXXXXXXXXXXXXDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 426
              A            DAGSRTIDLELTTLSST+HVEL+PSD GFQDRYIVQEIIKEMAKN
Sbjct: 61   TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN 120

Query: 427  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 606
            RPIDTKGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCC+SSSKVTEA+RSR
Sbjct: 121  RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR 180

Query: 607  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY 786
            CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIA+KS RSLRRAILSFETCRVQQY
Sbjct: 181  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQY 240

Query: 787  PFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPXXXXXXXXXX 966
            PF++NQ IPPMDWEEYV+EI SDIM+EQSPKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSE 299

Query: 967  XXXXXXXXXXXXVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 1128
                        VCHWAAYYEHRMR+GQKAIFH+EAFVAKFMSIYK FLIATFG
Sbjct: 300  LLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFVAKFMSIYKAFLIATFG 353


>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  585 bits (1507), Expect = e-164
 Identities = 287/354 (81%), Positives = 309/354 (87%)
 Frame = +1

Query: 67   MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 246
            MLWVDKYRPKTLD+V+VH+DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 247  PGAXXXXXXXXXXXXDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 426
              A            DAGSR+IDLELTTLSS HH+E++PSDAGFQDRY+VQEIIKEMAKN
Sbjct: 61   TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120

Query: 427  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 606
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCC+SSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 607  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY 786
            CLN+RINAP EEQIV+V+EFIGKKEGLQ+P GFAARIAEKS R+LRRAILSFETCRVQQY
Sbjct: 181  CLNIRINAPSEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQY 240

Query: 787  PFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPXXXXXXXXXX 966
            PFTN Q IPPMDWEEY++EIASDIMKEQ+PKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFTNRQTIPPMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFE 300

Query: 967  XXXXXXXXXXXXVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 1128
                        VCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK FLIATFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 354


>ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 354

 Score =  581 bits (1497), Expect = e-163
 Identities = 288/354 (81%), Positives = 308/354 (87%)
 Frame = +1

Query: 67   MLWVDKYRPKTLDKVLVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 246
            MLWVDKYRPKTLD+V+VH D+A NLKKLVTEQD PHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1    MLWVDKYRPKTLDQVMVHTDIAHNLKKLVTEQDSPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 247  PGAXXXXXXXXXXXXDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 426
            PGA            DAGSR++DLELTTLSS +H+E++PSDAGFQDRYIVQE+IKEMAKN
Sbjct: 61   PGAEKVKVENRTWKIDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN 120

Query: 427  RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR 606
            RPIDTKGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCC+SSS+VTEA+RSR
Sbjct: 121  RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 607  CLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY 786
            CLNVRINAP EEQIV+VLEFIGKKEGLQLPPGFAARIAEKS R+LRRAILSFETCRV QY
Sbjct: 181  CLNVRINAPSEEQIVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQY 240

Query: 787  PFTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPXXXXXXXXXX 966
            PFTN Q IPPMDWEEY++EIASDIMKEQSPKRLFQVRGKLYELL+NCIPP          
Sbjct: 241  PFTNKQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE 300

Query: 967  XXXXXXXXXXXXVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG 1128
                        VCHWAAYYE+RMRLGQKAIFHIEAFVAKFMSIYK FLIATFG
Sbjct: 301  LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG 354


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