BLASTX nr result

ID: Atractylodes21_contig00025352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025352
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    60   2e-07
dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]                 60   2e-07
ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    58   7e-07

>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 51/82 (62%)
 Frame = +3

Query: 30  NTESTKVTAESLRTFDTLYPDLRSINFQCSW*RYIKSRSRVSNSSQIVTPLKTIFLNLVS 209
           ++ES      + +T ++L  ++R++N  C+W RY+KSRS V     +VTP KTIF +L+ 
Sbjct: 18  DSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSIV-----VVTPFKTIFRSLIE 72

Query: 210 NLRVVDSVCIGTKKPLRDVSYD 275
           N   + S+ +G  K L+ +S+D
Sbjct: 73  NSSKIRSISVGVDKALKGMSFD 94


>dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 51/82 (62%)
 Frame = +3

Query: 30  NTESTKVTAESLRTFDTLYPDLRSINFQCSW*RYIKSRSRVSNSSQIVTPLKTIFLNLVS 209
           ++ES      + +T ++L  ++R++N  C+W RY+KSRS V     +VTP KTIF +L+ 
Sbjct: 18  DSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSIV-----VVTPFKTIFRSLIE 72

Query: 210 NLRVVDSVCIGTKKPLRDVSYD 275
           N   + S+ +G  K L+ +S+D
Sbjct: 73  NSSKIRSISVGVDKALKGMSFD 94


>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
 Frame = +3

Query: 27  RNTESTKVTAESL--RTFDTL-YPDLRSINFQCSW*RYIKSRSRVSNSSQIVTPLKTIFL 197
           R T+ST++    L  +TF+ L + D+RSIN  C+  RY+KSRS   N+   +TP K IF 
Sbjct: 15  RLTDSTELARCRLVSKTFNKLIFSDIRSINLTCTLSRYLKSRS--PNTKDQITPFKRIFN 72

Query: 198 NLV--SNLRVVDSVCIGTKKPLRDVSYD 275
            LV  S+  VVDSV IG +K L  ++YD
Sbjct: 73  RLVNRSDSLVVDSVTIGVEKSLCGITYD 100


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