BLASTX nr result

ID: Atractylodes21_contig00025334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025334
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago ...    82   8e-14
ref|XP_003598883.1| hypothetical protein MTR_3g022950 [Medicago ...    81   1e-13
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   4e-13
gb|ABN08665.1| reverse transcriptase - beet retrotransposon, put...    78   1e-12
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-12

>ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago truncatula]
           gi|355500907|gb|AES82110.1| hypothetical protein
           MTR_7g108440 [Medicago truncatula]
          Length = 848

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/126 (33%), Positives = 66/126 (52%)
 Frame = -3

Query: 417 SMKVMSLNIRGIHSTEKKLWIKELVLKQKPEFLGLQETKADVVEESMVLRFWPDGEFGFA 238
           SM V ++NIRGI    KK  I+EL+ + K +FL +Q+TK + +  ++    W   +  + 
Sbjct: 565 SMIVSTINIRGIEGGVKKRRIRELIRQNKVDFLAIQKTKLEDISSALCYNLWGSDDCQWY 624

Query: 237 HFPAFGRSGGLLSVWNTCSFSGDHAFGGEGYLAVIGKWKGVTENVGFLNVYGPHDIRKKE 58
             P+ G SGG+LS+W     +    FGG+GY+ V  +W  +      +NVY   D   K 
Sbjct: 625 FHPSEGNSGGILSLWRKSYANEVSCFGGDGYVGVCFEWGVLRHKCIVINVYVKCDSMSKR 684

Query: 57  MLWATL 40
            LW  +
Sbjct: 685 RLWEAI 690


>ref|XP_003598883.1| hypothetical protein MTR_3g022950 [Medicago truncatula]
            gi|355487931|gb|AES69134.1| hypothetical protein
            MTR_3g022950 [Medicago truncatula]
          Length = 840

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
 Frame = -3

Query: 408  VMSLNIRGIHSTEKKLWIKELVLKQKPEFLGLQETKADVVEESMVLRFWPDGEFGFAHFP 229
            ++S N+RG+   EK+  +  LV ++ P  L LQE+K  VV + +    W D    F+  P
Sbjct: 654  IISWNVRGLGGFEKRREVSNLVREKNPFILCLQESKLSVVNDIVCKGLWNDNHVDFSFQP 713

Query: 228  AFGRSGGLLSVWNT------CSFSGDHAFGGEGYLAVIGKWKGVTENVGFLNVYGPHDIR 67
            + G SGGL+++WN        SF+ DH  G +G     G      +    LNVY P D  
Sbjct: 714  SSGASGGLITLWNCEEVEVWSSFNFDHVLGIQGQFVKSG------DKFTILNVYAPCDFN 767

Query: 66   KKEMLWATLSRILTS 22
            ++++LW  +S  LTS
Sbjct: 768  RQQVLWHNISARLTS 782


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/122 (30%), Positives = 68/122 (55%)
 Frame = -3

Query: 414 MKVMSLNIRGIHSTEKKLWIKELVLKQKPEFLGLQETKADVVEESMVLRFWPDGEFGFAH 235
           M V+S NIRG+ +  K+  I++L+ K  P+F+ +QETK + +   +V   W   +  +  
Sbjct: 1   MSVLSWNIRGLTARVKRSAIRKLIQKHTPDFVFVQETKMEGISLEIVKTMWKSQDVEWTW 60

Query: 234 FPAFGRSGGLLSVWNTCSFSGDHAFGGEGYLAVIGKWKGVTENVGFLNVYGPHDIRKKEM 55
           +P+ G SGGL+S+WN  +FS   +   + ++A+ G +  +       NVY P+ +  +  
Sbjct: 61  YPSVGNSGGLISMWNKSAFSMKSSSVNQHWIAISGSFSRINFECILFNVYNPNTVGARAS 120

Query: 54  LW 49
           +W
Sbjct: 121 VW 122


>gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 152

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
 Frame = -3

Query: 414 MKVMSLNIRGIHSTEKKLWIKELVLKQKPEFLGLQETKADVVEESMVLRFWPDGEFGFAH 235
           MK++S+NIRG+ + EK+  I  LV ++K   L LQETK +VV+E +    W      F+ 
Sbjct: 1   MKILSVNIRGLGAPEKRREIHRLVAERKLTVLCLQETKLEVVDEFLCRSIWGPTPMAFSF 60

Query: 234 FPAFGRSGGLLSVWNTCSFSGDHAFGGEGYLAVIGKWKGVTENVGFLNVYGPHDIRKKEM 55
             + G SGG+++VW+               L + G +    +     N+Y P +IR ++M
Sbjct: 61  KSSVGASGGIITVWDPSVLDVWMTVNIANCLMIKGSFLKNNDMFCLANIYAPSNIRGRQM 120

Query: 54  LWATLSRILTSF-PCAWVV 1
           LW  +S  L S    AW V
Sbjct: 121 LWEAVSNFLLSHGDVAWCV 139


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/131 (29%), Positives = 68/131 (51%)
 Frame = -3

Query: 414 MKVMSLNIRGIHSTEKKLWIKELVLKQKPEFLGLQETKADVVEESMVLRFWPDGEFGFAH 235
           M ++S NIRG+ +  K+  I++L+ K  P  + +QETK + +    +   W +   G   
Sbjct: 1   MILLSWNIRGLGAKVKRSSIRKLIGKHDPHMIFIQETKLEKICPMFMRSIWNENNIGVCF 60

Query: 234 FPAFGRSGGLLSVWNTCSFSGDHAFGGEGYLAVIGKWKGVTENVGFLNVYGPHDIRKKEM 55
            P+ G SGGLLS+W  C F  + A   + ++ + GK         F+N+Y P D+  +  
Sbjct: 61  SPSQGSSGGLLSLWKKCFFELEEAKYDKNWIMLTGKILTSGFKCSFVNIYNPCDLNDRAQ 120

Query: 54  LWATLSRILTS 22
           +W  L+++  S
Sbjct: 121 VWLELAQLCIS 131


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