BLASTX nr result

ID: Atractylodes21_contig00025117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025117
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321817.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003631238.1| PREDICTED: uncharacterized protein LOC100854...    96   2e-18
ref|XP_002524141.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
ref|XP_004145474.1| PREDICTED: uncharacterized protein LOC101205...    79   5e-13
gb|ABK23488.1| unknown [Picea sitchensis]                              76   3e-12

>ref|XP_002321817.1| predicted protein [Populus trichocarpa] gi|222868813|gb|EEF05944.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 62/156 (39%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
 Frame = +2

Query: 14  NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTSSSCTAQGPRCRQ 193
           +YFTFP +VG T+ Y WV      C G+C   F WPKY G+P  +    +   + P    
Sbjct: 154 HYFTFPTIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGKPPPSTNGGNNIMRAPNGDP 213

Query: 194 NDKNNCS----GLTGVSNNQLSNTWYVPDYLTIPTK-TD*CV--------GSVQGEV--- 325
                 S     L  VS+N   N WY  D  T PT+  D C+        G   G+V   
Sbjct: 214 GVDGMISVLAHELAEVSSNPFINAWYAGDDPTSPTEIADLCLGVYGTGGGGGFVGKVNKD 273

Query: 326 --GECYNVKGIK-RRFLLQWV*DPMKRRCLGPNAKD 424
             G+ YNV G+K RRFL+QWV +P+KRRC GPNA D
Sbjct: 274 SWGDGYNVNGVKGRRFLVQWVWNPVKRRCFGPNAID 309


>ref|XP_003631238.1| PREDICTED: uncharacterized protein LOC100854077 [Vitis vinifera]
           gi|147798990|emb|CAN61638.1| hypothetical protein
           VITISV_008459 [Vitis vinifera]
          Length = 334

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 63/160 (39%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
 Frame = +2

Query: 14  NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTSSSCTAQGPRCRQ 193
           +YFTFP +VG T+ Y WV      C G+C   F WPKY GRP  +    +     P    
Sbjct: 179 HYFTFPTIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGRPPPSTNGGNNIMGAP---- 234

Query: 194 NDKNNCSGLTGV--------SNNQLSNTWYVPDYLTIPTK-TD*CV--------GSVQGE 322
           N      G+  V        S+N L N WY  D  T PT+  D C+        G   G 
Sbjct: 235 NGDAGVDGMISVIAHELAEMSSNPLVNAWYAGDDPTAPTEIADLCMGVYGSGGGGGYIGN 294

Query: 323 V-----GECYNVKGIK-RRFLLQWV*DPMKRRCLGPNAKD 424
           V     G  YNV G+K R+FL+QWV +P+KRRC GPNA D
Sbjct: 295 VYKDSWGNGYNVNGVKGRKFLVQWVWNPVKRRCFGPNAMD 334


>ref|XP_002524141.1| conserved hypothetical protein [Ricinus communis]
           gi|223536608|gb|EEF38252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 63/160 (39%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
 Frame = +2

Query: 14  NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTSSSCTAQGPRCRQ 193
           +YFTFP +VG T+ Y WV      C G+C   F WPKY G+P             P    
Sbjct: 175 HYFTFPNIVGVTVPYAWVGYSGTQCPGMCAYPFAWPKYSGKPPPNTKGGGNNIMRP---P 231

Query: 194 NDKNNCSG--------LTGVSNNQLSNTWYVPDYLTIPTK-TD*CV--------GSVQGE 322
           N      G        L  VS+N L N WY  D  T PT+  D C+        G   G+
Sbjct: 232 NGDAAVDGMISVIAHELAEVSSNPLVNAWYAGDDPTSPTEIADLCLGVYGTGGGGGYVGK 291

Query: 323 V-----GECYNVKGIK-RRFLLQWV*DPMKRRCLGPNAKD 424
           V     G+ YNV G+K R+FL+QWV +P KRRC GPNA D
Sbjct: 292 VYKDSWGDGYNVNGVKGRKFLVQWVWNPAKRRCFGPNALD 331


>ref|XP_004145474.1| PREDICTED: uncharacterized protein LOC101205825 [Cucumis sativus]
           gi|449527523|ref|XP_004170760.1| PREDICTED:
           uncharacterized protein LOC101229492 [Cucumis sativus]
          Length = 336

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 58/160 (36%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
 Frame = +2

Query: 14  NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTSSSCTAQGPRCRQ 193
           +YFTFP VVG T+ Y WV      C GVC   F       RPE +         G     
Sbjct: 183 HYFTFPSVVGATVPYAWVGHSGKQCPGVCAYPF------ARPEGSEAPPGSGIMGIMGAP 236

Query: 194 NDKNNCSGLTGV--------SNNQLSNTWYVPDYLTIPTK-TD*CVG--------SVQGE 322
           N      G+  V        S+N L N WY  D  T PT+  D C+G           G 
Sbjct: 237 NGDVGVDGMVSVIAHELAETSSNPLVNAWYAGDDPTAPTEIADLCMGLYGSGGGGGYVGN 296

Query: 323 V-----GECYNVKGIK-RRFLLQWV*DPMKRRCLGPNAKD 424
           V     G  YN+ G+  R+FL+QWV +P++RRC GPNA D
Sbjct: 297 VYRDYWGNGYNLNGVNGRKFLVQWVWNPVQRRCFGPNALD 336


>gb|ABK23488.1| unknown [Picea sitchensis]
          Length = 344

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 56/160 (35%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
 Frame = +2

Query: 14  NYFTFPFVVGFTLAYYWVQA*WD*CLGVCYCVFIWPKY*GRPEATWTSSSCTAQGPRCRQ 193
           +YFTFP +VG+TL Y WV      C  VC   F  P Y             T        
Sbjct: 197 HYFTFPSIVGYTLPYAWVGHSGKQCPEVCAYPFAVPSY------------MTGMKAFKAP 244

Query: 194 NDKNNCSGLTGV--------SNNQLSNTWYVPDYLTIPTK-TD*CV--------GSVQGE 322
           N      G+  V        S+N L N WY  +  T PT+  D C         GS  G+
Sbjct: 245 NGDVGIDGMISVIAHELAELSSNPLINAWYAGEDPTAPTEIADLCEGLYGTGGGGSYTGQ 304

Query: 323 V-----GECYNVKGIKRRFLLQWV*DPMKRRCLGPNAKDS 427
           V     G  YNV GI+RR+L+QW+  P+   C GPNA DS
Sbjct: 305 VLTDKFGANYNVNGIRRRYLVQWIWSPIMNACSGPNALDS 344


Top