BLASTX nr result

ID: Atractylodes21_contig00025114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025114
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    55   5e-06
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    49   5e-06

>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = +2

Query: 71  IKELKMLVFDGDDAYGWIYWVERYYEIQDIRPEEKLRAATLCMEGKHYHGINGVVE 238
           +K++++L+F+GDD  GWI   E Y+ +Q+  PE K+  A LCM+G   H   G++E
Sbjct: 81  VKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLE 136


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 49.3 bits (116), Expect(3) = 5e-06
 Identities = 19/44 (43%), Positives = 35/44 (79%)
 Frame = +2

Query: 74  KELKMLVFDGDDAYGWIYWVERYYEIQDIRPEEKLRAATLCMEG 205
           ++LK+ VF+G++  GWI+  ERY++I +I   ++L+AA++C+EG
Sbjct: 106 RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEG 149



 Score = 22.7 bits (47), Expect(3) = 5e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 208 ALSWYQWSSGVR 243
           AL+W+QW  G R
Sbjct: 151 ALAWFQWEEGRR 162



 Score = 21.9 bits (45), Expect(3) = 5e-06
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 234 WSEGRNPFR 260
           W EGR PFR
Sbjct: 157 WEEGRRPFR 165


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