BLASTX nr result

ID: Atractylodes21_contig00025051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025051
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27138.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   123   1e-26
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   123   1e-26
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   122   2e-26
ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212...   122   2e-26

>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = +1

Query: 1   GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
           GATKVCLCLDRR H + SLLS KL QWQGPALLAYNNA FTE+DF SISRIGGS K  QA
Sbjct: 55  GATKVCLCLDRRVHGSESLLSEKLAQWQGPALLAYNNAEFTEEDFVSISRIGGSNKHGQA 114

Query: 181 WKTGRFGVGFNSV 219
           WKTGRFGVGFNSV
Sbjct: 115 WKTGRFGVGFNSV 127


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317873|gb|EFH48295.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/73 (80%), Positives = 63/73 (86%)
 Frame = +1

Query: 1   GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
           GATKV LCLDRR H + SLLS  L QWQGP+LLAYN+AVFTE+DF SISRIGGSGK  QA
Sbjct: 44  GATKVRLCLDRRVHGSGSLLSDSLAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQA 103

Query: 181 WKTGRFGVGFNSV 219
           WKTGRFGVGFNSV
Sbjct: 104 WKTGRFGVGFNSV 116



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = +1

Query: 1    GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
            GA++V   LD+  + T+SLLS ++  WQGPAL  +NN+VFT+ D  +ISRIG + K  + 
Sbjct: 1416 GASEVTFLLDKTHYGTSSLLSPEMADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKP 1475

Query: 181  WKTGRFGVGFNSV 219
            +  GRFG+GFN V
Sbjct: 1476 FAIGRFGLGFNCV 1488


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332005740|gb|AED93123.1| C3HC4-type RING finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/73 (80%), Positives = 63/73 (86%)
 Frame = +1

Query: 1   GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
           GATKV LCLDRR H + SLLS  L QWQGP+LLAYN+AVFTE+DF SISRIGGSGK  QA
Sbjct: 44  GATKVRLCLDRRVHGSGSLLSDSLAQWQGPSLLAYNDAVFTEEDFVSISRIGGSGKHGQA 103

Query: 181 WKTGRFGVGFNSV 219
           WKTGRFGVGFNSV
Sbjct: 104 WKTGRFGVGFNSV 116



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = +1

Query: 1    GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
            GA++V   LD+  + T+SLLS ++  WQGPAL  +NN+VFT+ D  +ISRIG + K  + 
Sbjct: 1416 GASEVTFLLDKTHYGTSSLLSPEMADWQGPALYCFNNSVFTQQDMYAISRIGQASKLEKP 1475

Query: 181  WKTGRFGVGFNSV 219
            +  GRFG+GFN V
Sbjct: 1476 FAIGRFGLGFNCV 1488


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = +1

Query: 1   GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
           GATKVCLCLDRR H   SLLS+ L  +QGPALLAYNNAVFTE+DF SISRIGGS K  QA
Sbjct: 51  GATKVCLCLDRRVHGRESLLSASLAPFQGPALLAYNNAVFTEEDFVSISRIGGSNKHGQA 110

Query: 181 WKTGRFGVGFNSV 219
           WKTGRFGVGFNSV
Sbjct: 111 WKTGRFGVGFNSV 123



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = +1

Query: 1    GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
            G+++V   LD+  + T+S+LS ++  WQGPAL  YN++VF+  D  +ISR+G   K  + 
Sbjct: 1423 GSSEVIFLLDKTHYGTSSVLSPEMADWQGPALYCYNDSVFSPQDLYAISRVGQESKLQKP 1482

Query: 181  WKTGRFGVGFNSV 219
               GRFG+GFN V
Sbjct: 1483 LSIGRFGLGFNCV 1495


>ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212447 [Cucumis sativus]
          Length = 4709

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/73 (80%), Positives = 62/73 (84%)
 Frame = +1

Query: 1   GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
           GATKVCLCLDRR H   SLLS+ L  +QGPALLAYNNAVFTE+DF SISRIGGS K  QA
Sbjct: 51  GATKVCLCLDRRVHGRESLLSASLAPFQGPALLAYNNAVFTEEDFVSISRIGGSNKHGQA 110

Query: 181 WKTGRFGVGFNSV 219
           WKTGRFGVGFNSV
Sbjct: 111 WKTGRFGVGFNSV 123



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = +1

Query: 1    GATKVCLCLDRRFHATTSLLSSKLQQWQGPALLAYNNAVFTEDDFASISRIGGSGKQSQA 180
            G+++V   LD+  + T+S+LS ++  WQGPAL  YN++VF+  D  +ISR+G   K  + 
Sbjct: 1423 GSSEVIFLLDKTHYGTSSVLSPEMADWQGPALYCYNDSVFSPQDLYAISRVGQESKLQKP 1482

Query: 181  WKTGRFGVGFNSV 219
               GRFG+GFN V
Sbjct: 1483 LSIGRFGLGFNCV 1495


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