BLASTX nr result

ID: Atractylodes21_contig00025038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025038
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622762.1| Auxin-induced in root cultures protein [Medi...    86   4e-15
emb|CAA05999.1| hypothetical protein [Solanum tuberosum]               81   1e-13
ref|XP_002301813.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|ABK95767.1| unknown [Populus trichocarpa]                           77   1e-12
ref|XP_002533063.1| Auxin-induced in root cultures protein 12 pr...    75   5e-12

>ref|XP_003622762.1| Auxin-induced in root cultures protein [Medicago truncatula]
           gi|355497777|gb|AES78980.1| Auxin-induced in root
           cultures protein [Medicago truncatula]
          Length = 394

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = +3

Query: 6   GKISLEVLDSSAEYSGGVMKIFATVKLPETMTEVNHVWQVGGSVNDGMPAKHEFSPGNVK 185
           GK+S +V D  AE  GG+MKIFATVK+P  +T +NHVWQVG SV  GM A H+F+P N+ 
Sbjct: 117 GKLSFDVWDMKAEEDGGLMKIFATVKVPVNVTAINHVWQVGPSVTAGMIAPHDFNPSNLN 176

Query: 186 AMGKLQLEG 212
           + G+L L G
Sbjct: 177 SKGRLSLNG 185


>emb|CAA05999.1| hypothetical protein [Solanum tuberosum]
          Length = 156

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
 Frame = +3

Query: 3   EGKISLEVLDSSAEYSGGVMKIFATVKLPETMTEVNHVWQVGGSVNDGMPAKHEFSPGNV 182
           E K+   VLDS AE + GVMKIFAT++LP     VN VWQVG +V DGMP  H+F P N+
Sbjct: 32  ESKLMYNVLDSKAESADGVMKIFATLQLPANTKTVNQVWQVGSAVTDGMPRIHKFEPDNL 91

Query: 183 KAMGKLQL--------EGKTQSNATTTATGSPTIAPSTSSFSCTTGTYAAVVFFCI 326
            + G L L        +G  ++NAT+++  S      T   S    T      F +
Sbjct: 92  TSKGILDLATSGAAGGDGDKKTNATSSSASSGQSGNETGGSSRILNTETTFFAFLL 147


>ref|XP_002301813.1| predicted protein [Populus trichocarpa] gi|222843539|gb|EEE81086.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   EGKISLEVLDSSAEYSG--GVMKIFATVKLPETMTEVNHVWQVGGSVNDGMPAKHEFSPG 176
           E ++S +V D SAE +   G   I+A+VKLPE +   NH+WQVG +VN+G P KHEF+  
Sbjct: 121 EERLSFDVWDLSAETNATSGEFTIYASVKLPEKVESFNHIWQVGAAVNNGKPVKHEFAAE 180

Query: 177 NVKAMGKLQL--EGKTQSNATTT--ATGSPTIAPSTSSFSCTT-----GTYAAV---VFF 320
           N  A   L+L    KT  +ATTT  A G+ T   +TSS + TT     G+Y      V F
Sbjct: 181 NKDAKATLELTTAQKTGKSATTTTPAGGNSTGNGTTSSSNTTTNGGNSGSYRIKEMNVGF 240

Query: 321 CIFVRIL 341
           C  V +L
Sbjct: 241 CFAVFVL 247


>gb|ABK95767.1| unknown [Populus trichocarpa]
          Length = 165

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   EGKISLEVLDSSAEYSG--GVMKIFATVKLPETMTEVNHVWQVGGSVNDGMPAKHEFSPG 176
           E ++S +V D SAE +   G   I+A+VKLPE +   NH+WQVG +VN+G P KHEF+  
Sbjct: 32  EERLSFDVWDLSAETNATSGEFTIYASVKLPEKVESFNHIWQVGAAVNNGKPVKHEFAAE 91

Query: 177 NVKAMGKLQL--EGKTQSNATTT--ATGSPTIAPSTSSFSCTT-----GTYAAV---VFF 320
           N  A   L+L    KT  +ATTT  A G+ T   +TSS + TT     G+Y      V F
Sbjct: 92  NKDAKATLELTTAQKTGKSATTTTPAGGNSTGNGTTSSSNTTTNGGNSGSYRIKEMNVGF 151

Query: 321 CIFVRIL 341
           C  V +L
Sbjct: 152 CFAVFVL 158


>ref|XP_002533063.1| Auxin-induced in root cultures protein 12 precursor, putative
           [Ricinus communis] gi|223527161|gb|EEF29333.1|
           Auxin-induced in root cultures protein 12 precursor,
           putative [Ricinus communis]
          Length = 237

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
 Frame = +3

Query: 9   KISLEVLDSSAEYSGGVMKIFATVKLPETMTEVNHVWQVGGSVNDGMPAKHEFSPGNVKA 188
           K++++V D SAE S G   IF +VK+PE++ ++N +WQVG +VN+G PAKHEF+  N+ +
Sbjct: 123 KLAVDVWDVSAESSSGKFIIFGSVKVPESVEKLNQIWQVGPAVNNGFPAKHEFAQANLLS 182

Query: 189 MGKLQLEGKTQSNATTT--ATGS 251
            G L L   T  + T +  ATG+
Sbjct: 183 KGTLDLAVNTTGSGTNSGNATGN 205


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