BLASTX nr result

ID: Atractylodes21_contig00024848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024848
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   171   2e-40
ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus ...   167   3e-39
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   159   1e-36
ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   159   1e-36
ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   145   2e-32

>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 601

 Score =  171 bits (434), Expect = 2e-40
 Identities = 113/277 (40%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
 Frame = -3

Query: 861 SDQRRKRKRFLKPT-----HHFFSVRSXXXXXXXXXXXXXXFRR--NTPSLYSVVV---- 715
           S+QRRKRKR L+ +     H  FS RS               R    T S   VV+    
Sbjct: 3   SEQRRKRKRSLRASPSPHSHCGFSARSLILCLSFIFLLLLLHRFPIGTASFRPVVIVSTL 62

Query: 714 -LPGSSASSTYRQF--SGALTRIKIDDRVLFPDHILVLVSKDVGFGIGSWNGNRKALECV 544
            L  SS S++ R +  S  L  ++++DRVLFPDH+L++VS          N   + LECV
Sbjct: 63  SLLSSSTSNSIRDYVSSRLLLPLRVEDRVLFPDHVLLMVSHI--------NDRSEVLECV 114

Query: 543 YRSNNTDSGGVREEAWGVLSVDEYNDIRWLVRCPLPPANFSSVVSLRSQG-VSVVVDTAE 367
           Y  +       +     VLSVDE +++RW+ RCPLPP N+S+ V+LR       +VD  E
Sbjct: 115 YCKDIGVEAANKLIVRPVLSVDELDELRWVARCPLPPQNYSAEVNLRRPPRKESIVDGDE 174

Query: 366 G------GLNSWENLAYEAVLDGNTVVVFVKGISHRQNKESDPNRFCCHFGVGNE----K 217
                   ++SWE +AY A LD ++ VVFVKG++ R ++ESDP +F CHFG G+     K
Sbjct: 175 WLRRVHPTVHSWEMMAYAAALDRDSAVVFVKGLNLRPDRESDPRQFSCHFGTGDRERGGK 234

Query: 216 YMLTSRVLTAAQEVVRCVLPRSLETYPEKAKGVRVTV 106
           + LT+R  +AAQEV+RC LPRS+   P KA G+RVTV
Sbjct: 235 FALTTRAFSAAQEVIRCSLPRSIRMNPSKAHGIRVTV 271


>ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName:
           Full=UPF0392 protein RCOM_0530710
           gi|223540685|gb|EEF42248.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 578

 Score =  167 bits (424), Expect = 3e-39
 Identities = 115/304 (37%), Positives = 162/304 (53%), Gaps = 17/304 (5%)
 Frame = -3

Query: 861 SDQRRKRKRFLKP---THHFFSVRSXXXXXXXXXXXXXXFRRNTP----SLYSVVVLPGS 703
           S+QRRKRKR  KP   ++ FFSVRS                  +P    S   V+ +P S
Sbjct: 3   SEQRRKRKRIYKPDSTSNSFFSVRSLTACLSFFVFLLFISSDRSPIKTVSFRPVLNVPVS 62

Query: 702 SASS----TYRQFSGALTRIKIDDRVLFPDHILVLVSKDVGFGIGSWNGNRKALECVYRS 535
              +    T   F      + ++DRVL PDH+L++VS  V           + L+CVY +
Sbjct: 63  LLPTPLGLTRDSFDTKSLPLIVEDRVLLPDHVLLIVSNKVA--------TSQNLDCVYSN 114

Query: 534 NNTDSGGVREEAWGVLSVDEYNDIRWLVRCPLPPANFSSVVSLRS--QGVSVVVDTAEGG 361
                  V + A   LSV++Y+  + +VRC LPP N+S+ V LR   +    V   A   
Sbjct: 115 LYNSHDVVLKPA---LSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEAAEGVAAAAPAS 171

Query: 360 LNSWENLAYEAVLDGNTVVVFVKGISHRQNKESDPNRFCCHFGVG----NEKYMLTSRVL 193
           + SW+ + YEA+LD NTV VFVKG++ R +KESD ++F CHFG+     +E  + T+  +
Sbjct: 172 VVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDSSKFRCHFGLSKFDKDEGIVFTTEAI 231

Query: 192 TAAQEVVRCVLPRSLETYPEKAKGVRVTVSFRMPMLXXXXXXXXXXXVPLPSVAKIPGSR 13
           TAAQEV+RC+LPRS+   P KA+G+RVTVS                  PLPSVAK+ G++
Sbjct: 232 TAAQEVIRCLLPRSIRNNPVKAQGIRVTVS-------RINAGEDGVDAPLPSVAKVYGAK 284

Query: 12  SQTK 1
           S  K
Sbjct: 285 SYEK 288


>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  159 bits (402), Expect = 1e-36
 Identities = 111/310 (35%), Positives = 155/310 (50%), Gaps = 24/310 (7%)
 Frame = -3

Query: 870 MDSSDQRRKRKRFLKPTHH--FFSVRSXXXXXXXXXXXXXXFRRNTPSLYSVVVLPGSSA 697
           MD   QRRKRKRF + + H  FF+ RS                    S+ +    P   A
Sbjct: 1   MDWEQQRRKRKRFGRSSSHVQFFTRRSLFLCLSFFAFLLFLSSSRWFSIAAASFRPVLDA 60

Query: 696 SSTY--------------RQFSGALTRIKIDDRVLFPDHILVLVSKDVGFGIGSWNGNRK 559
           SST                  S   + +KI+ RVLFPDH+L++VS + G          +
Sbjct: 61  SSTTLSRLSTSASKSTLDNSLSSKYSPLKIESRVLFPDHLLLMVSGEFG--------RDE 112

Query: 558 ALECVYRSNNTDSGGVREEAWGVLSVDEYNDIRWLVRCPLPPANFS-SVVSLRSQGVSVV 382
            L+C+Y  +             VLS D+Y++ R + RCPLPP N+S S V LR  GV   
Sbjct: 113 KLDCLYHKSVARGSDRETLKQSVLSTDKYDEFRSIARCPLPPLNYSASAVDLRRGGVEAD 172

Query: 381 ---VDTAEGGLNSWENLAYEAVLDGNTVVVFVKGISHRQNKESDPNRFCCHFGVGNE--- 220
              +      + SWE + YEA +DGNTVVVF KG++ R ++ES+P  F CHF +GN    
Sbjct: 173 DHWLVRNRHPVASWERVVYEAAIDGNTVVVFAKGLNLRPHRESNPAEFSCHFRLGNSNNN 232

Query: 219 -KYMLTSRVLTAAQEVVRCVLPRSLETYPEKAKGVRVTVSFRMPMLXXXXXXXXXXXVPL 43
            +Y+ T++ + AAQE++RC LP S+ +  +K KG+RVTVS                 V L
Sbjct: 233 GEYVHTTKAVAAAQEIIRCSLPASVPSSLDKEKGIRVTVS------RGSIHSKTHLQVTL 286

Query: 42  PSVAKIPGSR 13
           PSVA++  SR
Sbjct: 287 PSVARLFDSR 296


>ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  159 bits (401), Expect = 1e-36
 Identities = 103/280 (36%), Positives = 145/280 (51%), Gaps = 24/280 (8%)
 Frame = -3

Query: 870 MDSSDQRRKRKRFLKPTHH--FFSVRSXXXXXXXXXXXXXXFRRNTPSLYSVVVLPGSSA 697
           MD   QRRKRKRF + + H  FF+ RS                    S+ +    P   A
Sbjct: 1   MDWEQQRRKRKRFGRSSSHVQFFTRRSLFLCLSFFAFLLFLSSSRWFSIAAASFRPVLDA 60

Query: 696 SSTY--------------RQFSGALTRIKIDDRVLFPDHILVLVSKDVGFGIGSWNGNRK 559
           SST                  S   + +KI+ RVLFPDH+L++VS + G          +
Sbjct: 61  SSTTLSRLSTSASKSTLDNSLSSKYSPLKIESRVLFPDHLLLMVSGEFG--------RDE 112

Query: 558 ALECVYRSNNTDSGGVREEAWGVLSVDEYNDIRWLVRCPLPPANFS-SVVSLRSQGVSVV 382
            L+C+Y  +             VLS D+Y++ R + RCPLPP N+S S V LR  GV   
Sbjct: 113 KLDCLYHKSVARGSDRETLKQSVLSTDKYDEFRSIARCPLPPLNYSASAVDLRRGGVEAD 172

Query: 381 ---VDTAEGGLNSWENLAYEAVLDGNTVVVFVKGISHRQNKESDPNRFCCHFGVGNE--- 220
              +      + SWE + YEA +DGNTVVVF KG++ R ++ES+P  F CHF +GN    
Sbjct: 173 DHWLVRNRHPVASWERVVYEAAIDGNTVVVFAKGLNLRPHRESNPAEFSCHFRLGNSNNN 232

Query: 219 -KYMLTSRVLTAAQEVVRCVLPRSLETYPEKAKGVRVTVS 103
            +Y+ T++ + AAQE++RC LP S+ +  +K KG+RVTVS
Sbjct: 233 GEYVHTTKAVAAAQEIIRCSLPASVPSSLDKEKGIRVTVS 272


>ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  145 bits (365), Expect = 2e-32
 Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 35/292 (11%)
 Frame = -3

Query: 870 MDSSDQRRKRKRFLKPTH-HFFSVRSXXXXXXXXXXXXXXFRRN-----TPSLY------ 727
           MD   QRRKRKR +   H H  S RS              +  +     TPS +      
Sbjct: 1   MDPELQRRKRKRVVAARHLHISSSRSLFLCFSFLIFLLFWYSHHHFFFFTPSTFRPSLTA 60

Query: 726 -SVVVLPGSSASSTYRQFSGALTRIKIDDRVLFPDHILVLVSKDVGFGIGSWNGNRKALE 550
            ++ +L  S+++S    F        +  R+LFPDH L++++                LE
Sbjct: 61  STLSLLYSSASNSVLDPFQPTAPSYSLQHRILFPDHHLLIITNPQ-------QQKLHELE 113

Query: 549 CVYRS--NNTDSGGVREEAWGV-----LSVDEYNDIRWLVRCPLPPANFSS-----VVSL 406
           CVY +   N  S G  E  + V     LS D Y++ R +VRCPL   N S+      V +
Sbjct: 114 CVYYTLHPNASSSGSPEPVFQVHVRPVLSTDRYDESRSIVRCPLTQTNSSAGDASKAVDM 173

Query: 405 RSQG------VSVVVDTAEGGLNSWENLAYEAVLDGNTVVVFVKGISHRQNKESDPNRFC 244
           R +G      + V+++       SW+ +AYEA LDG+TVVVFVKG++ R +K SDP R  
Sbjct: 174 RRRGEVGHRNLGVLMNQTA---QSWDRVAYEATLDGDTVVVFVKGLNLRPHKISDPTRIR 230

Query: 243 CHFGV----GNEKYMLTSRVLTAAQEVVRCVLPRSLETYPEKAKGVRVTVSF 100
           CHFG+     +  ++LT+R ++ AQEVVRC+LP+S+   P+KA+G+RVTVS+
Sbjct: 231 CHFGLKSFDKDNAFLLTTRAVSVAQEVVRCMLPQSMRNNPDKARGIRVTVSY 282


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