BLASTX nr result

ID: Atractylodes21_contig00024720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024720
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319108.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   103   1e-20
ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207...   103   1e-20
ref|NP_187100.1| RNA recognition motif-containing protein [Arabi...   103   1e-20
ref|XP_002884448.1| hypothetical protein ARALYDRAFT_477706 [Arab...   103   1e-20

>ref|XP_002319108.1| predicted protein [Populus trichocarpa] gi|222857484|gb|EEE95031.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/65 (76%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KAALASSXXXXXXXXXXXAIPRKAAGLAWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 17
           KAALASS           A+PRKAAGL WEDPTL+EWPENDYR+FCGDLGNEVNDDVLSK
Sbjct: 73  KAALASSEIEHKAETKKKAVPRKAAGLTWEDPTLAEWPENDYRVFCGDLGNEVNDDVLSK 132

Query: 16  AFSRF 2
           AFSRF
Sbjct: 133 AFSRF 137


>ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207945
           [Cucumis sativus]
          Length = 253

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/65 (80%), Positives = 54/65 (83%)
 Frame = -2

Query: 196 KAALASSXXXXXXXXXXXAIPRKAAGLAWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 17
           KAALASS           AIPRKAAG +WEDPTL+EWPENDYRLFCGDLGNEVNDDVLSK
Sbjct: 104 KAALASSEIEHKAEXKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSK 163

Query: 16  AFSRF 2
           AFSRF
Sbjct: 164 AFSRF 168


>ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207945 [Cucumis sativus]
          Length = 253

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/65 (78%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KAALASSXXXXXXXXXXXAIPRKAAGLAWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 17
           KAALASS           AIPRKAAG +WEDPTL+EWPENDYRLFCGDLGNEVNDDVLSK
Sbjct: 104 KAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSK 163

Query: 16  AFSRF 2
           AFSRF
Sbjct: 164 AFSRF 168


>ref|NP_187100.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7547109|gb|AAF63781.1| unknown protein [Arabidopsis
           thaliana] gi|26451670|dbj|BAC42931.1| unknown protein
           [Arabidopsis thaliana] gi|28973333|gb|AAO63991.1|
           putative RRM-containing protein [Arabidopsis thaliana]
           gi|332640568|gb|AEE74089.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 245

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/65 (78%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KAALASSXXXXXXXXXXXAIPRKAAGLAWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 17
           KAALASS           AIPRKAAG +WEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK
Sbjct: 96  KAALASSETEHKAETKKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 155

Query: 16  AFSRF 2
           AF+RF
Sbjct: 156 AFARF 160


>ref|XP_002884448.1| hypothetical protein ARALYDRAFT_477706 [Arabidopsis lyrata subsp.
           lyrata] gi|297330288|gb|EFH60707.1| hypothetical protein
           ARALYDRAFT_477706 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/65 (78%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 KAALASSXXXXXXXXXXXAIPRKAAGLAWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 17
           KAALASS           AIPRKAAG +WEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK
Sbjct: 96  KAALASSETEHKAETKKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLGNEVNDDVLSK 155

Query: 16  AFSRF 2
           AF+RF
Sbjct: 156 AFTRF 160


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