BLASTX nr result

ID: Atractylodes21_contig00024398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024398
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786...    79   3e-13
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...    74   9e-12
gb|ABA94767.2| retrotransposon protein, putative, unclassified [...    74   2e-11
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...    73   2e-11
ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [S...    72   5e-11

>ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786145 [Glycine max]
          Length = 649

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = -2

Query: 196 LFYVDDIVLTTFLESLRQVIISKLSKEFAMKDLGPLSYFLGISVTQHASGIFLSQKKYAT 17
           L YVDDI+ TT   SLR  II+ L  EF+M DLGPL+YFLG+S T+H+ G+FL Q KYA 
Sbjct: 116 LLYVDDIIHTTSSHSLRDTIIAALRSEFSMMDLGPLNYFLGVSTTRHSGGLFLHQSKYAE 175

Query: 16  *IIVR 2
            II R
Sbjct: 176 DIISR 180


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1064

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/75 (53%), Positives = 54/75 (72%)
 Frame = -2

Query: 226 EGNHLAYS*ELFYVDDIVLTTFLESLRQVIISKLSKEFAMKDLGPLSYFLGISVTQHASG 47
           +G+++AY   L YVDDI+LT    SL Q I ++L  EFAM DLG L +FLGISVT+ A G
Sbjct: 781 DGDNIAYL--LLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGISVTRSADG 838

Query: 46  IFLSQKKYAT*IIVR 2
           +FLSQ++YA  ++ R
Sbjct: 839 LFLSQRQYAVDLLRR 853


>gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 2446

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/74 (50%), Positives = 53/74 (71%)
 Frame = -2

Query: 223 GNHLAYS*ELFYVDDIVLTTFLESLRQVIISKLSKEFAMKDLGPLSYFLGISVTQHASGI 44
           G+ +AY   L YVDDI+LT    SL Q ++++L  EFAM DLG L +FLGISVT+ ++G+
Sbjct: 755 GDRIAYL--LLYVDDIILTALTTSLLQQLMARLHSEFAMTDLGDLHFFLGISVTRSSAGL 812

Query: 43  FLSQKKYAT*IIVR 2
           FLSQ++Y   ++ R
Sbjct: 813 FLSQRQYVVDLLQR 826


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/75 (50%), Positives = 54/75 (72%)
 Frame = -2

Query: 226 EGNHLAYS*ELFYVDDIVLTTFLESLRQVIISKLSKEFAMKDLGPLSYFLGISVTQHASG 47
           +G+++AY   L YVDDI+LT    +L Q I ++L  EFAM DLG L +FLGISVT+ + G
Sbjct: 693 DGDNIAYL--LLYVDDIILTASSATLLQHITARLHSEFAMTDLGDLHFFLGISVTRSSDG 750

Query: 46  IFLSQKKYAT*IIVR 2
           +FLSQ++YA  ++ R
Sbjct: 751 LFLSQRQYAVDLLKR 765


>ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
           gi|241943826|gb|EES16971.1| hypothetical protein
           SORBIDRAFT_08g010840 [Sorghum bicolor]
          Length = 725

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = -2

Query: 226 EGNHLAYS*ELFYVDDIVLTTFLESLRQVIISKLSKEFAMKDLGPLSYFLGISVTQHASG 47
           EG   AY   L YVDDIVLT   ++L + II +L  EFAM DLG L +FLGISVT+ + G
Sbjct: 490 EGGASAYL--LLYVDDIVLTASSDALLRCIIDRLHSEFAMTDLGELHHFLGISVTRSSDG 547

Query: 46  IFLSQKKYA 20
           +FLSQ++YA
Sbjct: 548 LFLSQRQYA 556


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