BLASTX nr result

ID: Atractylodes21_contig00024327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024327
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    89   5e-16
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    87   1e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    86   3e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    77   1e-12
ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232...    73   3e-11

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 54/129 (41%), Positives = 82/129 (63%), Gaps = 9/129 (6%)
 Frame = -3

Query: 362  LTNLKLQVKRAKGLYFK----YGPRHQCRKWGLNILVYREKLDSTGS---RGLEEEPRED 204
            LT  +LQ +R KGL+FK    + P H+C+K    +LV+ ++ +       R  EE    +
Sbjct: 979  LTESELQARREKGLWFKCEEKFSPGHRCKKELRVLLVHEDEEEDDNQFDDRATEEPALIE 1038

Query: 203  IEMA-EVSLNSVSGLTTPKTMKLEGTVEGVMVIVLIDSGDSYNFIAKALVNQLQIPV-SK 30
            ++ A E+SLNSV GLTTP TMK++GT+    VI+L+DSG ++NF++  LV QL +P+ + 
Sbjct: 1039 LKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTT 1098

Query: 29   TEHMVTMGT 3
            T + V MGT
Sbjct: 1099 TSYGVMMGT 1107


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/133 (41%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
 Frame = -3

Query: 377 GRFHHLTNLKLQVKRAKGLYFK----YGPRHQCRKWGLNILVYR--EKLDSTGSRGLEEE 216
           G    LT  +LQ KRAKGL FK    +G  HQCR+  L++L     E+ +  G+    E 
Sbjct: 398 GEMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEA 457

Query: 215 PREDIEMA--EVSLNSVSGLTTPKTMKLEGTVEGVMVIVLIDSGDSYNFIAKALVNQLQI 42
           P    E    EVSLNSV GL+ PKTMKL G ++   V+V+ID G ++NF++   +++L I
Sbjct: 458 PPSPTEEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGI 517

Query: 41  PVSKTEHM-VTMG 6
           PV+++E   V++G
Sbjct: 518 PVTESEEFGVSLG 530


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 12/137 (8%)
 Frame = -3

Query: 377 GRFHHLTNLKLQVKRAKGLYF----KYGPRHQCRKWGLNILVYREKLDSTGSRGLE---- 222
           G    L+  +LQ KR  GL F    K+   H+C+K  L+IL+  E+ +      +E    
Sbjct: 332 GEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQP 391

Query: 221 ---EEPREDIEMAEVSLNSVSGLTTPKTMKLEGTVEGVMVIVLIDSGDSYNFIAKALVNQ 51
              ++ + +I   E+SLNSV G+++PKT+K+EGT+ G  VIV++D G ++NFI+   V +
Sbjct: 392 AHPDDSQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRR 451

Query: 50  LQIPVSKTEHM-VTMGT 3
           LQIP+S +    V++GT
Sbjct: 452 LQIPISSSRPFGVSLGT 468


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 14/139 (10%)
 Frame = -3

Query: 377 GRFHHLTNLKLQVKRAKGLYF----KYGPRHQCRKWGLNILVYREKLDSTGSRGLEEEPR 210
           G    L+  +LQ KR +GL F    K+   H+C+K  L++L+  ++ +      LE  P+
Sbjct: 289 GEIRRLSEKELQHKRERGLCFRCDDKWSVGHRCKK-ELSVLLSCKEDEEIEYGELENAPQ 347

Query: 209 EDIEMA---------EVSLNSVSGLTTPKTMKLEGTVEGVMVIVLIDSGDSYNFIAKALV 57
            +I            E+SLNSV G + PKT+KL GT+ G  VIV+ID G ++NF++   V
Sbjct: 348 PEIPNTHIAETFVNPEISLNSVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTV 407

Query: 56  NQLQIPVSKTEHM-VTMGT 3
            +L IPVS  +   V++GT
Sbjct: 408 ERLNIPVSHAKGFEVSLGT 426


>ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
          Length = 701

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
 Frame = -3

Query: 362 LTNLKLQVKRAKGLYF----KYGPRHQCR---KWGLNILVYREKLDSTGSRGLEEEPRED 204
           L++ + + +  KGL F    KY P H+C+   K  L +L+  E+ D       E+E  E 
Sbjct: 215 LSDTEFRARLDKGLCFRCNEKYSPGHRCKGREKRELMLLILNEEEDHERESNTEDEASEI 274

Query: 203 IEMAEVSLNS--------VSGLTTPKTMKLEGTVEGVMVIVLIDSGDSYNFIAKALVNQL 48
           IE+ ++ LN         ++G+T+  TMKL+G V G  V++LIDSG + NFI++ LV++L
Sbjct: 275 IELNQLELNEDTPIELRLITGVTSKGTMKLKGHVNGKEVVILIDSGATNNFISQVLVDEL 334

Query: 47  QIPV 36
           Q+ +
Sbjct: 335 QLSI 338


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