BLASTX nr result

ID: Atractylodes21_contig00024326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024326
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD39356.2| OSJNBa0059H15.7 [Oryza sativa Japonica Group]          65   6e-09
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc...    65   7e-09
gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-...    65   7e-09
emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]          65   7e-09
emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]          65   7e-09

>emb|CAD39356.2| OSJNBa0059H15.7 [Oryza sativa Japonica Group]
          Length = 920

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 2   FIGDILIYSKSQEEHAEHLRTVLELLSKEKLYAKFSKC 115
           FI DILIYSK +EEHAEHLR VLE L K KLYAKFSKC
Sbjct: 275 FIDDILIYSKDEEEHAEHLRLVLEKLQKHKLYAKFSKC 312


>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1030

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 2   FIGDILIYSKSQEEHAEHLRTVLELLSKEKLYAKFSKC 115
           FI DILIYSK +EEHAEHLR VLE L K KLYAKFSKC
Sbjct: 390 FIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKC 427


>gb|AAX92958.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550032|gb|ABA92829.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 669

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 2   FIGDILIYSKSQEEHAEHLRTVLELLSKEKLYAKFSKC 115
           FI DILIYSK +EEHAEHLR VLE L K KLYAKFSKC
Sbjct: 214 FIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKC 251


>emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]
          Length = 1644

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 2   FIGDILIYSKSQEEHAEHLRTVLELLSKEKLYAKFSKC 115
           FI DILIYSK +EEHAEHLR VLE L K KLYAKFSKC
Sbjct: 784 FIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKC 821


>emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
          Length = 1606

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%)
 Frame = +2

Query: 2   FIGDILIYSKSQEEHAEHLRTVLELLSKEKLYAKFSKC 115
           FI DILIYSK +EEHAEHLR VLE L K KLYAKFSKC
Sbjct: 627 FIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKC 664


Top