BLASTX nr result

ID: Atractylodes21_contig00024291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024291
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   434   e-119
ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   431   e-119
ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   427   e-117
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   420   e-115
ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114

>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  434 bits (1117), Expect = e-119
 Identities = 217/309 (70%), Positives = 255/309 (82%), Gaps = 3/309 (0%)
 Frame = -2

Query: 919  FTIAPATASDLDDALSVERLSNGVYRVGVHIADVSYFVLPHTALDVEAQIRSTSVYLLRH 740
            FTI P+TA+DLDDALSVERL NG+ RVGVHIADVSYFVLP +ALD EAQ RSTSVYLLR 
Sbjct: 501  FTIDPSTATDLDDALSVERLPNGILRVGVHIADVSYFVLPDSALDKEAQARSTSVYLLRG 560

Query: 739  KLPMLPPLLSDNSGSLSPGVERLAFSIIWDINLYGEVIDRWIGRTVVQSCCKLSYEHAQD 560
            KLPMLPPLLS+N GSL+PGV+RLAF+I W++N  G+V DRWIGRTV+QSCCKLSY+HAQ+
Sbjct: 561  KLPMLPPLLSENLGSLNPGVDRLAFTIFWELNSTGDVTDRWIGRTVIQSCCKLSYQHAQE 620

Query: 559  IISGTLNVSSLN---NGCPQLHGHFTWSDMITSVQNLHEISGVLKEKRFKDGALSLDVPK 389
            ++ G +   + N   N  PQL+G F WSD+I SV++L+EIS  L+EKRF DGAL L+  K
Sbjct: 621  MVDGVIREEACNTFGNSLPQLYGPFDWSDVIRSVKSLNEISKTLREKRFNDGALQLESSK 680

Query: 388  TVFLFDEDGTPYDSVLSGRTESYFLVEEFMLLANKTAAEVITRAYPSSALLRRHPEPNLS 209
              FLFDE G PYDSVL GR +S FLVEEFMLLAN+TAAEVI+RA+P SALLRRHP PN+ 
Sbjct: 681  IGFLFDEYGIPYDSVLCGRKDSDFLVEEFMLLANRTAAEVISRAFPDSALLRRHPAPNMR 740

Query: 208  KLRELEAFCSKQGLQLDTSTSGELHRSLECIRNELKNDSVLFHVLMSYATRPMQLATYFC 29
            KLRE EAFC K GLQLD+S+SG  H+SLECIR +LK+DSVL  +LMSYA+RPMQLATYFC
Sbjct: 741  KLREFEAFCCKHGLQLDSSSSGNFHQSLECIRGKLKDDSVLCGILMSYASRPMQLATYFC 800

Query: 28   SGDSTDSAN 2
            SG   D+ N
Sbjct: 801  SGVMKDNMN 809


>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  431 bits (1109), Expect = e-119
 Identities = 217/309 (70%), Positives = 249/309 (80%), Gaps = 3/309 (0%)
 Frame = -2

Query: 919  FTIAPATASDLDDALSVERLSNGVYRVGVHIADVSYFVLPHTALDVEAQIRSTSVYLLRH 740
            FTI P+TA+DLDDALSVE+LS G +RVGVHIAD SYFVLP   LD EAQ RSTSVYLL+H
Sbjct: 526  FTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYLLQH 585

Query: 739  KLPMLPPLLSDNSGSLSPGVERLAFSIIWDINLYGEVIDRWIGRTVVQSCCKLSYEHAQD 560
            KLPMLPPLLS+N GSL PGV+RLAFSI WDINL G+V+DRWIGRTV+QSCCKLSYEHAQ 
Sbjct: 586  KLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEHAQG 645

Query: 559  IISGTLNVSS---LNNGCPQLHGHFTWSDMITSVQNLHEISGVLKEKRFKDGALSLDVPK 389
            II G  +V     L N CPQLHGHF   ++I S++ L+ IS  L+  RF DGAL LD  K
Sbjct: 646  IIDGMFDVEGSKILGNDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFNDGALLLDGAK 705

Query: 388  TVFLFDEDGTPYDSVLSGRTESYFLVEEFMLLANKTAAEVITRAYPSSALLRRHPEPNLS 209
             + LFDE G PYDS  S R +S  LVEEFMLLANKTAAE+I+RA+P +ALLRRHPEPNL 
Sbjct: 706  VILLFDEHGVPYDSTFSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALLRRHPEPNLR 765

Query: 208  KLRELEAFCSKQGLQLDTSTSGELHRSLECIRNELKNDSVLFHVLMSYATRPMQLATYFC 29
            KLRE EAFCSK GL+LDTS+SG+ + SLE IR +LKNDSVLF +L+SYA+RPMQLATYFC
Sbjct: 766  KLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLATYFC 825

Query: 28   SGDSTDSAN 2
            SGD  D+ N
Sbjct: 826  SGDLKDNKN 834


>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1184

 Score =  427 bits (1098), Expect = e-117
 Identities = 214/309 (69%), Positives = 254/309 (82%), Gaps = 3/309 (0%)
 Frame = -2

Query: 919  FTIAPATASDLDDALSVERLSNGVYRVGVHIADVSYFVLPHTALDVEAQIRSTSVYLLRH 740
            FTI P+TA+DLDDALS+E+L NG YRVGVHIADVSYFVLP TALD EA+ RSTSVY+L+ 
Sbjct: 586  FTIDPSTATDLDDALSIEKLPNGNYRVGVHIADVSYFVLPDTALDNEAKFRSTSVYMLQR 645

Query: 739  KLPMLPPLLSDNSGSLSPGVERLAFSIIWDINLYGEVIDRWIGRTVVQSCCKLSYEHAQD 560
            KLPMLP LLS+N GSLSPGV+RLA S++ DIN+ G+V+DRWIGRTV+QSCCKLSYEHAQD
Sbjct: 646  KLPMLPALLSENIGSLSPGVDRLAVSMLLDINVAGDVVDRWIGRTVIQSCCKLSYEHAQD 705

Query: 559  IISGTLNVSSLN---NGCPQLHGHFTWSDMITSVQNLHEISGVLKEKRFKDGALSLDVPK 389
            II    +    N   +G P+++GHF W D+I S+++L+EIS VLK+KRF DGAL L+ PK
Sbjct: 706  IIDKAFDFEGSNFIEDGYPRVYGHFEWPDVIMSLESLYEISNVLKQKRFTDGALRLENPK 765

Query: 388  TVFLFDEDGTPYDSVLSGRTESYFLVEEFMLLANKTAAEVITRAYPSSALLRRHPEPNLS 209
             V LFDE+G PYDS LS R ES FLVEE+MLLAN+ AAEVI RAYP  ALLRRHPEPN+ 
Sbjct: 766  VVILFDENGVPYDSRLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMR 825

Query: 208  KLRELEAFCSKQGLQLDTSTSGELHRSLECIRNELKNDSVLFHVLMSYATRPMQLATYFC 29
            KLRE  AFC K GL+L+TS+SGELH SLE IR +LK D VL+++L+SYATRPMQLA+YFC
Sbjct: 826  KLREFMAFCQKHGLELNTSSSGELHWSLEQIREKLKGDPVLYNILISYATRPMQLASYFC 885

Query: 28   SGDSTDSAN 2
            SGD  DS N
Sbjct: 886  SGDLKDSEN 894


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score =  420 bits (1079), Expect = e-115
 Identities = 210/309 (67%), Positives = 250/309 (80%), Gaps = 3/309 (0%)
 Frame = -2

Query: 919  FTIAPATASDLDDALSVERLSNGVYRVGVHIADVSYFVLPHTALDVEAQIRSTSVYLLRH 740
            FTI P+TA+DLDDALS+E L NG YRVGVHIADVSYFVLP T LD EAQ RSTSVY+L+ 
Sbjct: 534  FTIDPSTATDLDDALSIEELPNGNYRVGVHIADVSYFVLPDTPLDSEAQFRSTSVYMLQR 593

Query: 739  KLPMLPPLLSDNSGSLSPGVERLAFSIIWDINLYGEVIDRWIGRTVVQSCCKLSYEHAQD 560
            KLPMLP LLS+N GSLSPG +RLA S++ DINL G+V+DRWIGRTV+ SCCKLSYEHAQD
Sbjct: 594  KLPMLPALLSENIGSLSPGGDRLAVSMLLDINLAGDVVDRWIGRTVIHSCCKLSYEHAQD 653

Query: 559  IISGTLNVSSLN---NGCPQLHGHFTWSDMITSVQNLHEISGVLKEKRFKDGALSLDVPK 389
            II    +    N   +G P+++GHF W D+I S+++L+EIS VLK+KRF DGAL L+ PK
Sbjct: 654  IIDKAFDFEGSNFSEDGYPRVYGHFEWPDVIKSLKSLYEISNVLKQKRFTDGALRLENPK 713

Query: 388  TVFLFDEDGTPYDSVLSGRTESYFLVEEFMLLANKTAAEVITRAYPSSALLRRHPEPNLS 209
             V LFDE+G PYDS+LS R ES FLVEE+MLLAN+ AAEVI RAYP  ALLRRHPEPN+ 
Sbjct: 714  VVILFDENGVPYDSMLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMR 773

Query: 208  KLRELEAFCSKQGLQLDTSTSGELHRSLECIRNELKNDSVLFHVLMSYATRPMQLATYFC 29
            KLRE  AFC K GL+L+TS+SG+ H SLE IR +LK D VL+++L+S+ATRPMQLA+YFC
Sbjct: 774  KLREFMAFCQKHGLELNTSSSGQFHWSLEQIREKLKGDPVLYNILISFATRPMQLASYFC 833

Query: 28   SGDSTDSAN 2
            SGD  DS N
Sbjct: 834  SGDLKDSEN 842


>ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|222843977|gb|EEE81524.1|
            predicted protein [Populus trichocarpa]
          Length = 860

 Score =  418 bits (1074), Expect = e-114
 Identities = 209/309 (67%), Positives = 250/309 (80%), Gaps = 3/309 (0%)
 Frame = -2

Query: 919  FTIAPATASDLDDALSVERLSNGVYRVGVHIADVSYFVLPHTALDVEAQIRSTSVYLLRH 740
            FTI P++A+DLDDALSV++L NG+ RVGVHIADVSYFVLP TALD+EAQ RSTSVY+LR 
Sbjct: 401  FTIDPSSATDLDDALSVQKLPNGLVRVGVHIADVSYFVLPDTALDMEAQFRSTSVYMLRR 460

Query: 739  KLPMLPPLLSDNSGSLSPGVERLAFSIIWDINLYGEVIDRWIGRTVVQSCCKLSYEHAQD 560
            K+PMLPPLLS+N GSL+PGV+RLAFSI WD N  G V+DRWI RTV+QSCCKLSYEHAQ 
Sbjct: 461  KIPMLPPLLSENLGSLNPGVDRLAFSIFWDFNSSGNVVDRWIDRTVIQSCCKLSYEHAQG 520

Query: 559  IISGTLNVSSLN---NGCPQLHGHFTWSDMITSVQNLHEISGVLKEKRFKDGALSLDVPK 389
            I+ G ++  + N   +  PQLHGHF W+D+I SV  LHEIS  L+EKRF +GAL L+  K
Sbjct: 521  IVDGMIDTETCNTFGDSLPQLHGHFEWADVIGSVVCLHEISKTLREKRFDNGALRLESSK 580

Query: 388  TVFLFDEDGTPYDSVLSGRTESYFLVEEFMLLANKTAAEVITRAYPSSALLRRHPEPNLS 209
             VFLFDE G PYDS L  R +S F+VEEFMLLAN TAAE+I+RA+P SALLRRHPEPN+ 
Sbjct: 581  IVFLFDEYGIPYDSSLCERKDSNFIVEEFMLLANFTAAEIISRAFPDSALLRRHPEPNMR 640

Query: 208  KLRELEAFCSKQGLQLDTSTSGELHRSLECIRNELKNDSVLFHVLMSYATRPMQLATYFC 29
            KLRE EAFC K GL+LDTS SG   +SLE I+ +LK+D  LF++L++YA+RPMQLATYFC
Sbjct: 641  KLREFEAFCCKHGLELDTS-SGNFQQSLERIKEKLKDDPELFNILINYASRPMQLATYFC 699

Query: 28   SGDSTDSAN 2
            SGD  D+ N
Sbjct: 700  SGDLKDNMN 708


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