BLASTX nr result

ID: Atractylodes21_contig00024280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024280
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-15
emb|CBI24025.3| unnamed protein product [Vitis vinifera]               73   2e-14
ref|XP_002331551.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002886476.1| predicted protein [Arabidopsis lyrata subsp....    79   5e-13
gb|AAC17616.1| Contains similarity to box helicases gb|U29097 fr...    77   2e-12

>ref|XP_002317142.1| predicted protein [Populus trichocarpa] gi|222860207|gb|EEE97754.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score = 80.1 bits (196), Expect(2) = 2e-15
 Identities = 35/43 (81%), Positives = 42/43 (97%)
 Frame = +3

Query: 276 SCTKVAVDFVSPENIQECIRLTEEFRKLPIDHKAREDKLEVTK 404
           SCTKVAVDFVSPENI+EC+RLTEEFR+LP++H+AREDKLE+ K
Sbjct: 637 SCTKVAVDFVSPENIRECLRLTEEFRQLPVNHRAREDKLEIKK 679



 Score = 27.7 bits (60), Expect(2) = 2e-15
 Identities = 10/22 (45%), Positives = 19/22 (86%)
 Frame = +1

Query: 475 LQVKKMILHAMHQSLTDYEELT 540
           L++KKMI++A+ +++ D +ELT
Sbjct: 675 LEIKKMIIYAIDKAIIDLQELT 696


>emb|CBI24025.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 72.8 bits (177), Expect(2) = 2e-14
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 276 SCTKVAVDFVSPENIQECIRLTEEFRKLPIDHKAREDKLEVTK 404
           SC KVA+DFVSPENI EC+RLTEEFR LP +H+A+EDKLEV K
Sbjct: 779 SCIKVALDFVSPENIHECVRLTEEFRALPHNHRAKEDKLEVKK 821



 Score = 31.2 bits (69), Expect(2) = 2e-14
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +1

Query: 475 LQVKKMILHAMHQSLTDYEELTG 543
           L+VKKM LHA+ Q++ + E+LTG
Sbjct: 817 LEVKKMSLHALRQAVDNLEQLTG 839


>ref|XP_002331551.1| predicted protein [Populus trichocarpa] gi|222873775|gb|EEF10906.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 35/43 (81%), Positives = 42/43 (97%)
 Frame = +3

Query: 276 SCTKVAVDFVSPENIQECIRLTEEFRKLPIDHKAREDKLEVTK 404
           SCTKVAVDFVSPENI+EC+RLTEEFR+LP++H+AREDKLE+ K
Sbjct: 630 SCTKVAVDFVSPENIKECLRLTEEFRQLPMNHRAREDKLEIKK 672


>ref|XP_002886476.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332317|gb|EFH62735.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 931

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 38/51 (74%), Positives = 45/51 (88%)
 Frame = +3

Query: 276 SCTKVAVDFVSPENIQECIRLTEEFRKLPIDHKAREDKLEVTKSHTIYLLY 428
           SCTKVAVDFVSPENI EC+RLTEEFR+LP +HKAREDKLE +   ++YL+Y
Sbjct: 844 SCTKVAVDFVSPENIHECLRLTEEFRQLPKNHKAREDKLEASLL-SLYLIY 893


>gb|AAC17616.1| Contains similarity to box helicases gb|U29097 from C. elegans and
           to the ENBP1 gene product gb|X95995 from Vicia sativa
           [Arabidopsis thaliana]
          Length = 851

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = +3

Query: 276 SCTKVAVDFVSPENIQECIRLTEEFRKLPIDHKAREDKLEVTK 404
           SCTKVAVDFVSPENI EC+RLT+EFR+LP +HKAREDKLE+ K
Sbjct: 788 SCTKVAVDFVSPENIDECLRLTDEFRQLPKNHKAREDKLEIKK 830


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