BLASTX nr result

ID: Atractylodes21_contig00024209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024209
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   108   4e-24
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   105   9e-24
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   106   2e-23
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   106   2e-23
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   103   3e-23

>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  108 bits (270), Expect(2) = 4e-24
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -2

Query: 330  RKLKDDGTWTLEHLPAGKKALGSQWVYRLQFRSNGSLERHKACLNILGNHQVEGIDFKET 151
            R L+++GTWTLE LP GK+ALGSQWVYR ++ SNG +ER K+ L +LGNHQ  GID+ ET
Sbjct: 973  RALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHET 1032

Query: 150  FAPVVKMVTVRTFLVVGAA 94
            F+PV KM TVRTFL + A+
Sbjct: 1033 FSPVAKMTTVRTFLAIAAS 1051



 Score = 28.1 bits (61), Expect(2) = 4e-24
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 74   DVDYAFLLSDLEEIVCMHPPPGY 6
            DV  AFL  DLEE V M  PPG+
Sbjct: 1060 DVHNAFLHGDLEEEVYMKLPPGF 1082


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  105 bits (263), Expect(2) = 9e-24
 Identities = 48/72 (66%), Positives = 62/72 (86%)
 Frame = -2

Query: 324  LKDDGTWTLEHLPAGKKALGSQWVYRLQFRSNGSLERHKACLNILGNHQVEGIDFKETFA 145
            L++ GTWT+E LP GKKALG +WV+RL+++S+G+LERHKA L +LGN+Q EG+D+ ETFA
Sbjct: 1000 LENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNNQTEGLDYTETFA 1059

Query: 144  PVVKMVTVRTFL 109
            PV KMVTVR FL
Sbjct: 1060 PVAKMVTVRAFL 1071



 Score = 29.6 bits (65), Expect(2) = 9e-24
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 107  LLALPVVIGNFDVDYAFLLSDLEEIVCMHPPPGYR 3
            +++L   +   DV  AFL  DL+E V M  PPG+R
Sbjct: 1074 VVSLDWEVHQMDVHNAFLHGDLDEEVYMQFPPGFR 1108


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  106 bits (265), Expect(2) = 2e-23
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = -2

Query: 330  RKLKDDGTWTLEHLPAGKKALGSQWVYRLQFRSNGSLERHKACLNILGNHQVEGIDFKET 151
            R L+++GTWTLE LP GK+ALGSQWVYR ++ SNG +ER K+ L +LGNHQ  GID+ ET
Sbjct: 973  RALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHET 1032

Query: 150  FAPVVKMVTVRTFLVVGAA 94
            F+PV KM TVR FL + A+
Sbjct: 1033 FSPVAKMTTVRAFLAIAAS 1051



 Score = 28.1 bits (61), Expect(2) = 2e-23
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 74   DVDYAFLLSDLEEIVCMHPPPGY 6
            DV  AFL  DLEE V M  PPG+
Sbjct: 1060 DVHNAFLHGDLEEEVYMKLPPGF 1082


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  106 bits (265), Expect(2) = 2e-23
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = -2

Query: 330 RKLKDDGTWTLEHLPAGKKALGSQWVYRLQFRSNGSLERHKACLNILGNHQVEGIDFKET 151
           R L+++GTWTLE LP GK+ALGSQWVYR ++ SNG +ER K+ L +LGNHQ  GID+ ET
Sbjct: 690 RALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHET 749

Query: 150 FAPVVKMVTVRTFLVVGAA 94
           F+PV KM TVR FL + A+
Sbjct: 750 FSPVAKMTTVRAFLAIAAS 768



 Score = 28.1 bits (61), Expect(2) = 2e-23
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 74  DVDYAFLLSDLEEIVCMHPPPGY 6
           DV  AFL  DLEE V M  PPG+
Sbjct: 777 DVHNAFLHGDLEEEVYMKLPPGF 799


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  103 bits (258), Expect(2) = 3e-23
 Identities = 47/77 (61%), Positives = 61/77 (79%)
 Frame = -2

Query: 324  LKDDGTWTLEHLPAGKKALGSQWVYRLQFRSNGSLERHKACLNILGNHQVEGIDFKETFA 145
            L+ + TW +  LP GKKA+ S+WVY+L++ S+G+LERHKA L ++GNHQ EG+DFKETFA
Sbjct: 1010 LEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFA 1069

Query: 144  PVVKMVTVRTFLVVGAA 94
            PV K+ TVRT L V AA
Sbjct: 1070 PVAKLTTVRTILAVAAA 1086



 Score = 29.6 bits (65), Expect(2) = 3e-23
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 86   IGNFDVDYAFLLSDLEEIVCMHPPPGYR 3
            +   DV  AFL  DLEE V M  PPG++
Sbjct: 1091 VHQMDVHNAFLHGDLEEEVYMRLPPGFK 1118


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