BLASTX nr result

ID: Atractylodes21_contig00024194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024194
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    99   4e-19
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...    97   1e-18
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    93   2e-17
ref|XP_002874850.1| F-box family protein [Arabidopsis lyrata sub...    91   7e-17
ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...    91   1e-16

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 59/149 (39%), Positives = 83/149 (55%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYRSSQLRRLKIAYHCASMLGSWAEALKKFPLLEELSIYSMDI 182
           ++I +  F  DELL Y+A RSS LR L++          + EA+ K PL+E L +    +
Sbjct: 422 VEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGFIEAVVKLPLIEYLELSHCSL 481

Query: 183 SKEAIETAGRYCPKLKTLKVNNLAWXXXXXXXFNVNEIAIAIGXXXXXXXXXXXVGDSMS 362
           S E+++  G+ CP LKTLK+N+          FN NE A+AI             G+ ++
Sbjct: 482 SGESLKVVGQSCPNLKTLKLNSEPDPKFNDDEFN-NEEALAIAESMPELRHLQLFGNILT 540

Query: 363 NIGLLAILDGCRHLKSLDLSKCLYIDLKG 449
           N+GL AILDGC HL+ LDL KC  +DL G
Sbjct: 541 NVGLNAILDGCPHLEHLDLRKCSNVDLTG 569



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYR--------SSQLRRLKIAYHCASMLGSW-AEALKKFPLLE 155
           ++I +  F  D+LL Y+A R        SS LR L++   C  +     AEA+ K PLLE
Sbjct: 84  LEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLV-RCHQITDKGVAEAVVKLPLLE 142

Query: 156 ELSIYSMDISKEAIETAGRYCPKLKTLKVNNLAWXXXXXXXFNVNEIAIAIGXXXXXXXX 335
           +L +     S E +   G+ CP L TLK+N            + N  AIAI         
Sbjct: 143 DLEVSYCSFSGECLSVVGQSCPHLTTLKLNRRPRVEFVINMRDHN--AIAIAESMPELRH 200

Query: 336 XXXVGDSMSNIGLLAILDGCRHLKSLDLSKCLYIDL 443
              +G++++N GL AILD C HL  LDL +C  I+L
Sbjct: 201 LQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINL 236


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/149 (38%), Positives = 83/149 (55%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYRSSQLRRLKIAYHCASMLGSWAEALKKFPLLEELSIYSMDI 182
           I I++  F  D L+ Y+A RSS L+RL++         ++++A KKFPLLEEL I    +
Sbjct: 94  ISISIEYFATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDISYCSL 153

Query: 183 SKEAIETAGRYCPKLKTLKVNNLAWXXXXXXXFNVNEIAIAIGXXXXXXXXXXXVGDSMS 362
           S EA+   G  CP L++LK+N   +          NE A+AIG            G+ ++
Sbjct: 154 STEALVGVGISCPLLRSLKLNCQGY---KRPHIESNEEALAIGQWMPHLRYLQIFGNKLT 210

Query: 363 NIGLLAILDGCRHLKSLDLSKCLYIDLKG 449
           N G+ AILDGC HL+ LDL +C  + L+G
Sbjct: 211 NDGVQAILDGCPHLEFLDLRQCFNVHLEG 239


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYRSSQLRRLKIAYHCASMLGSWAEALKKFPLLEELSIYSMDI 182
           IDI +  F  D+LL  +A  +S L+RL++A   +       +A +KFP LEEL I   ++
Sbjct: 98  IDINIEYFGTDDLLHRIANSASHLQRLRLASCWSISDEGLCDAAEKFPCLEELDISISNL 157

Query: 183 SKEAIETAGRYCPKLKTLKVNN-------LAWXXXXXXXFNVNEIAIAIGXXXXXXXXXX 341
           S    E  GR CP+LKTLK N+       + +       ++ NE A AI           
Sbjct: 158 SDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNE-AFAIAKYMPGLRHLQ 216

Query: 342 XVGDSMSNIGLLAILDGCRHLKSLDLSKCLYIDLKG 449
            +G+ M+N GL+A+LDGC HL+SLD+ +C  ++L G
Sbjct: 217 LIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVG 252


>ref|XP_002874850.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320687|gb|EFH51109.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYRSSQLRRLKIAYHCASMLGSWA-EALKKFPLLEELSI-YSM 176
           I+I +    N  LL Y+A RSS LRRL +   C  ++ S   EA+ K PLLEEL I Y  
Sbjct: 96  IEINIEHLVNTSLLNYIADRSSNLRRLGVV-DCGPVVSSGVVEAVMKLPLLEELEITYKS 154

Query: 177 DISKEAIETAGRYCPKLKTLKVNNLAWXXXXXXXFNVNEIAIAIGXXXXXXXXXXXVGDS 356
            I  + ++  G+ CP L+TLK+N +            +++A+AIG             + 
Sbjct: 155 SIRGQVLKVVGQSCPNLRTLKLNCIGNFKCC------DKVALAIGETMPGLRHLQLYRNG 208

Query: 357 MSNIGLLAILDGCRHLKSLDLSKCLYIDLKG 449
           +S+ GL AIL+GC HL++LDL KCL I+L G
Sbjct: 209 LSDTGLNAILEGCPHLENLDLHKCLNINLVG 239


>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
 Frame = +3

Query: 3   IDITMVEFCNDELLLYVAYRSSQLRRLKIA----YHCASMLGSWAEALKKFPLLEELSIY 170
           ++I +  F +DELLLY+A  S Q+RRL++     Y    +LG    A+ + PLLE L I 
Sbjct: 86  VEINIEHFGSDELLLYIANSSKQVRRLRLMGYSLYFTKEVLGV---AVSELPLLEHLEIQ 142

Query: 171 S--MDISKEAIETAGRYCPKLKTLKVNNLAWXXXXXXXFNVNEIAIAIGXXXXXXXXXXX 344
           S  + +  E + T GR C  LK+LK+  L +        + +E A+AI            
Sbjct: 143 SFIIGLDPETLRTIGRCCHLLKSLKLKELCYIGFIS---SSDEDALAIAETMPNLHHLEI 199

Query: 345 VGDSMSNIGLLAILDGCRHLKSLDLSKCLYID 440
           VG+S++N GL A+LD C  L+SLDL KC+Y+D
Sbjct: 200 VGNSITNFGLHALLDSCSGLQSLDLRKCMYLD 231


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