BLASTX nr result

ID: Atractylodes21_contig00024175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024175
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   186   3e-45
ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   180   2e-43
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   176   2e-42

>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  186 bits (471), Expect = 3e-45
 Identities = 85/131 (64%), Positives = 103/131 (78%), Gaps = 3/131 (2%)
 Frame = +1

Query: 76  MIASLFLALFLPCAGMSVVFLVYMCLLCYAASHLQDT---APVKPVAENGLSAAELEKIP 246
           M+ S+FLALFLPC GMS +FL+Y+CLL YAA+H   +    PVKP AE GLSA++LEK+P
Sbjct: 45  MLLSVFLALFLPCVGMSAIFLIYICLLWYAANHHHHSEIVTPVKPSAEKGLSASDLEKLP 104

Query: 247 TTTGQELGSGTECAVCLDDIEAEQPARVFPGCNHGFHLQCADNWLSRNPVCPVCRNKLEP 426
             TG+EL  GTECAVCLD+IE+EQPAR+ PGCNHGFHL+CAD WLS + VCPVCR KL+ 
Sbjct: 105 KMTGKELILGTECAVCLDEIESEQPARLVPGCNHGFHLECADTWLSNHSVCPVCRAKLDS 164

Query: 427 EFFQPPETNPC 459
           +FF     NPC
Sbjct: 165 QFFNASTDNPC 175


>ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|222843677|gb|EEE81224.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  180 bits (457), Expect = 1e-43
 Identities = 89/147 (60%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
 Frame = +1

Query: 37  LSVRRGAHDTLGK-MIASLFLALFLPCAGMSVVFLVYMCLLCYAASHLQDTAP--VKPVA 207
           LS    A  T G+ M+ S+  ALFLPC GMSVVF +Y+CLL YAA++  +  P  VK V 
Sbjct: 19  LSFNSDASFTTGQNMLVSVLFALFLPCVGMSVVFFIYICLLWYAANNQPENIPLPVKTVT 78

Query: 208 ENGLSAAELEKIPTTTGQELGSGTECAVCLDDIEAEQPARVFPGCNHGFHLQCADNWLSR 387
           E GLS++ELEK+P  TG+EL  GTECAVCLDDIE+EQ AR+ PGCNHGFHL+CAD WLS+
Sbjct: 79  EKGLSSSELEKLPKVTGKELVLGTECAVCLDDIESEQLARIVPGCNHGFHLECADTWLSK 138

Query: 388 NPVCPVCRNKLEPEFFQ---PPETNPC 459
           +PVCPVCR KL+ +F      PE NPC
Sbjct: 139 HPVCPVCRAKLDAQFSSTSASPENNPC 165


>ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 130

 Score =  180 bits (456), Expect = 2e-43
 Identities = 85/132 (64%), Positives = 101/132 (76%), Gaps = 4/132 (3%)
 Frame = +1

Query: 76  MIASLFLALFLPCAGMSVVFLVYMCLLCYAASHLQ----DTAPVKPVAENGLSAAELEKI 243
           M+ S+ LALFLPC GMS VF+VYMCLL YA +       D  PVKPV + GLSA ELEK+
Sbjct: 1   MLDSVLLALFLPCLGMSGVFIVYMCLLWYATTRRNQPPIDGQPVKPVTDKGLSALELEKL 60

Query: 244 PTTTGQELGSGTECAVCLDDIEAEQPARVFPGCNHGFHLQCADNWLSRNPVCPVCRNKLE 423
           P  TG+EL  GTECAVCLD+IE+EQPARV PGCNHGFH+QCAD WLS++P+CPVCR KL+
Sbjct: 61  PKITGKELVLGTECAVCLDEIESEQPARVVPGCNHGFHVQCADTWLSKHPICPVCRTKLD 120

Query: 424 PEFFQPPETNPC 459
           P+ F     +PC
Sbjct: 121 PQIF--TSQSPC 130


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/134 (62%), Positives = 102/134 (76%), Gaps = 6/134 (4%)
 Frame = +1

Query: 76  MIASLFLALFLPCAGMSVVFLVYMCLLCYAASHLQDTA-PVKPVAENGLSAAELEKIPTT 252
           M+ S+FLALFLPCAGMS VF+VY+CLL Y A++  +   PVK V E GLS++ELEK+P  
Sbjct: 1   MLVSVFLALFLPCAGMSAVFIVYICLLWYTANNQPEIRLPVKTVTEKGLSSSELEKLPKV 60

Query: 253 TGQELGSGTECAVCLDDIEAEQPARVFPGCNHGFHLQCADNWLSRNPVCPVCRNKLEPEF 432
           TG+EL  GTECAVCLDDIE+EQ AR+ PGCNHGFHL+CAD WL++ PVCPVCR KL+ + 
Sbjct: 61  TGKELVLGTECAVCLDDIESEQVARMVPGCNHGFHLECADTWLTKRPVCPVCRAKLDAQL 120

Query: 433 FQPP-----ETNPC 459
           F  P     E N C
Sbjct: 121 FSTPPPPAQENNTC 134


>ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 131

 Score =  176 bits (447), Expect = 2e-42
 Identities = 85/133 (63%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
 Frame = +1

Query: 76  MIASLFLALFLPCAGMSVVFLVYMCLLCYAAS--HLQ---DTAPVKPVAENGLSAAELEK 240
           M+ S+ LALFLPC GMS VF+VYMCLL YA +  H Q   D  PVKPVA+ GLSA ELEK
Sbjct: 1   MLDSVLLALFLPCLGMSGVFIVYMCLLWYATTRHHQQPPIDGQPVKPVADKGLSALELEK 60

Query: 241 IPTTTGQELGSGTECAVCLDDIEAEQPARVFPGCNHGFHLQCADNWLSRNPVCPVCRNKL 420
           +P  TG+EL  G ECAVCLD+IE+EQPAR+ PGCNHGFH+ CAD WLS++P+CPVCR KL
Sbjct: 61  LPRVTGKELVLGNECAVCLDEIESEQPARLVPGCNHGFHVHCADTWLSKHPLCPVCRTKL 120

Query: 421 EPEFFQPPETNPC 459
           +P+ F     +PC
Sbjct: 121 DPQIF--TSQSPC 131


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