BLASTX nr result

ID: Atractylodes21_contig00024174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024174
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271517.1| PREDICTED: uncharacterized protein LOC100265...    66   3e-09
ref|XP_002534434.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003537485.1| PREDICTED: uncharacterized protein LOC100801...    63   2e-08
ref|XP_003600879.1| Nuclear pore complex protein-related protein...    60   1e-07
ref|XP_002312155.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002271517.1| PREDICTED: uncharacterized protein LOC100265724 [Vitis vinifera]
           gi|297736620|emb|CBI25491.3| unnamed protein product
           [Vitis vinifera]
          Length = 814

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -1

Query: 198 NQRRQIPGRKGNSEDDEISHLKSSIAKLSIVNSENTKKVKLVDSALRNREST 43
           NQ+R I GRK   ED +IS LKS+IAKLS+VNSEN K+VK+V+SAL+++E T
Sbjct: 761 NQQRHISGRKNFVEDAQISQLKSAIAKLSLVNSENAKRVKVVESALKSQERT 812


>ref|XP_002534434.1| conserved hypothetical protein [Ricinus communis]
           gi|223525302|gb|EEF27949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 760

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/61 (55%), Positives = 49/61 (80%)
 Frame = -1

Query: 225 SSSPQSKRPNQRRQIPGRKGNSEDDEISHLKSSIAKLSIVNSENTKKVKLVDSALRNRES 46
           + SP++K  NQ+RQ+ G K    D +IS LKSS+AKLS+VN+EN+KKVKLV+S L+++ES
Sbjct: 700 TQSPRAKVLNQQRQMSG-KNYVRDVQISQLKSSLAKLSLVNNENSKKVKLVESVLKSQES 758

Query: 45  T 43
           +
Sbjct: 759 S 759


>ref|XP_003537485.1| PREDICTED: uncharacterized protein LOC100801853 [Glycine max]
          Length = 806

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/54 (53%), Positives = 46/54 (85%)
 Frame = -1

Query: 210 SKRPNQRRQIPGRKGNSEDDEISHLKSSIAKLSIVNSENTKKVKLVDSALRNRE 49
           SK  +Q+++ PG+K  + DD++S LKSS+ KLS++N+EN+KKV+LV+S+LRN+E
Sbjct: 742 SKANHQQQKTPGKKSYAGDDQMSLLKSSLEKLSLLNTENSKKVELVESSLRNKE 795


>ref|XP_003600879.1| Nuclear pore complex protein-related protein [Medicago truncatula]
           gi|355489927|gb|AES71130.1| Nuclear pore complex
           protein-related protein [Medicago truncatula]
          Length = 874

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/54 (55%), Positives = 43/54 (79%)
 Frame = -1

Query: 210 SKRPNQRRQIPGRKGNSEDDEISHLKSSIAKLSIVNSENTKKVKLVDSALRNRE 49
           SK   Q+++I G+K ++ DD+IS LKS++ KLSIVN EN+KKVK+V+S+L N E
Sbjct: 807 SKASQQQKKISGKKISAGDDQISILKSALEKLSIVNIENSKKVKIVESSLNNTE 860


>ref|XP_002312155.1| predicted protein [Populus trichocarpa] gi|222851975|gb|EEE89522.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -1

Query: 198 NQRRQIPGRKGNSEDDEISHLKSSIAKLSIVNSENTKKVKLVDSALRNREST 43
           NQ+ +I GR   + D +I  LKSSIAKLS++NSENTKKVKLV+S L+N+ES+
Sbjct: 591 NQQMKIGGRN-YALDAQILQLKSSIAKLSLLNSENTKKVKLVESVLKNQESS 641


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