BLASTX nr result

ID: Atractylodes21_contig00024137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024137
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   175   4e-42
ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...   172   2e-41
ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding prote...   167   1e-39
ref|XP_002515546.1| protein with unknown function [Ricinus commu...   167   1e-39
ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|1...   166   1e-39

>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/154 (55%), Positives = 94/154 (61%)
 Frame = +3

Query: 3   HLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXTMNSSLFGFTGPDVRPGDWYCN 182
           H+NFQRRDSCQRC                             S FGFTG DVRPGDWYCN
Sbjct: 14  HMNFQRRDSCQRCGDPKSGGGDFGSFGGR-----------GGSSFGFTGSDVRPGDWYCN 62

Query: 183 VGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMVXXXXXXXXXXXXXXXXXXWKSGD 362
            GNCGAHNFASRS+CFKCGAFKD+ A   GG+D DM                   WKSGD
Sbjct: 63  AGNCGAHNFASRSNCFKCGAFKDESA---GGYDSDM---SRSRGFGFGGGSGRSGWKSGD 116

Query: 363 WICGRPGCNEHNFASRMECFRCNAPREPTSKSPY 464
           WIC R GCNEHNFASRMECFRCNAPR+ ++K+ Y
Sbjct: 117 WICSRSGCNEHNFASRMECFRCNAPRDLSNKTSY 150



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/98 (33%), Positives = 42/98 (42%)
 Frame = +3

Query: 159 RPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMVXXXXXXXXXXXXXXX 338
           RPGDW C   +C   NF  R SC +CG    D  +G G F                    
Sbjct: 3   RPGDWNCR--SCQHMNFQRRDSCQRCG----DPKSGGGDF------GSFGGRGGSSFGFT 50

Query: 339 XXXWKSGDWICGRPGCNEHNFASRMECFRCNAPREPTS 452
               + GDW C    C  HNFASR  CF+C A ++ ++
Sbjct: 51  GSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDESA 88


>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/157 (54%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   HLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXTMNSSLFGFTGPDVRPGDWYCN 182
           +LNFQRRDSCQRC                         +  SS FGFTGPDVRPGDWYC 
Sbjct: 14  YLNFQRRDSCQRCGEPRPGDRGDYGGF-----------SRGSSSFGFTGPDVRPGDWYCT 62

Query: 183 VGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMV---XXXXXXXXXXXXXXXXXXWK 353
           +GNCGAHNFASRSSCFKCG  KD+    SGG++ DM                      WK
Sbjct: 63  IGNCGAHNFASRSSCFKCGGLKDE---SSGGYEGDMSRPRGFGFGSGGSSGSGIGRSGWK 119

Query: 354 SGDWICGRPGCNEHNFASRMECFRCNAPREPTSKSPY 464
           SGDWIC R GCNEHNFASRMECFRCNAPR+  +KS Y
Sbjct: 120 SGDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSY 156



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/98 (32%), Positives = 40/98 (40%)
 Frame = +3

Query: 159 RPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMVXXXXXXXXXXXXXXX 338
           RPGDW C   +C   NF  R SC +CG  +       GGF                    
Sbjct: 3   RPGDWNCR--SCQYLNFQRRDSCQRCGEPRPGDRGDYGGFS----------RGSSSFGFT 50

Query: 339 XXXWKSGDWICGRPGCNEHNFASRMECFRCNAPREPTS 452
               + GDW C    C  HNFASR  CF+C   ++ +S
Sbjct: 51  GPDVRPGDWYCTIGNCGAHNFASRSSCFKCGGLKDESS 88


>ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 159

 Score =  167 bits (422), Expect = 1e-39
 Identities = 87/156 (55%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   HLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXTMNSSLFGFT-GPDVRPGDWYC 179
           HLNFQRR+SCQRC                            SS FGFT GPDVRPGDWYC
Sbjct: 14  HLNFQRRESCQRCGEPRSGGGGDYGGGFGGGR--------GSSSFGFTTGPDVRPGDWYC 65

Query: 180 NVGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMVXXXXXXXXXXXXXXXXXXWKSG 359
            VGNCGAHNFASRSSCFKCGA K+D  + +G FD DM                   WKSG
Sbjct: 66  TVGNCGAHNFASRSSCFKCGAPKED--SSAGPFDADM--PRMRPYGFGGGSSARPGWKSG 121

Query: 360 DWICGRPGCNEHNFASRMECFRCNAPREPTS-KSPY 464
           DWIC R GCNEHNFA+RMEC+RCNAPR+ +S +SPY
Sbjct: 122 DWICTRSGCNEHNFANRMECYRCNAPRDSSSARSPY 157


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/147 (57%), Positives = 88/147 (59%)
 Frame = +3

Query: 3   HLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXTMNSSLFGFTGPDVRPGDWYCN 182
           HLNFQRRDSCQRC                            SS FGFTGPDVRPGDWYC 
Sbjct: 14  HLNFQRRDSCQRCREPRPGERGDHYSSFGGR---------GSSSFGFTGPDVRPGDWYCT 64

Query: 183 VGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDMVXXXXXXXXXXXXXXXXXXWKSGD 362
            GNCGAHNFASRSSCFKCGA KD+    SGGFD +M                   WKSGD
Sbjct: 65  FGNCGAHNFASRSSCFKCGASKDE---SSGGFDGEM--SRMRGFGFGSGSTSRSGWKSGD 119

Query: 363 WICGRPGCNEHNFASRMECFRCNAPRE 443
           WIC R GCNEHNFASR EC+RCNAPR+
Sbjct: 120 WICTRSGCNEHNFASRTECYRCNAPRD 146


>ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|118482028|gb|ABK92945.1|
           unknown [Populus trichocarpa]
           gi|222854629|gb|EEE92176.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/157 (54%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   HLNFQRRDSCQRCXXXXXXXXXXXXXXXXXXXXXXXXXTMNSSLFGFTGPDVRPGDWYCN 182
           HLNFQRRDSCQRC                           +   FGFTGPDVRPGDWYC 
Sbjct: 14  HLNFQRRDSCQRCGDPRPGERDHYGSFGGRS---------SGGSFGFTGPDVRPGDWYCT 64

Query: 183 VGNCGAHNFASRSSCFKCGAFKDDLATGSGGFDCDM--VXXXXXXXXXXXXXXXXXXWKS 356
            GNCGAHNFASRSSCFKCG  KD+  +  GG D DM  +                  WKS
Sbjct: 65  AGNCGAHNFASRSSCFKCGVSKDE--SSGGGLDADMSRMRGYGFGGGGGGGSGSSRNWKS 122

Query: 357 GDWICGRPGCNEHNFASRMECFRCNAPREPTS-KSPY 464
           GDWIC R GCNEHNFASR EC+RCNAPRE +S KS Y
Sbjct: 123 GDWICTRSGCNEHNFASRTECYRCNAPRESSSNKSSY 159



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
 Frame = +3

Query: 159 RPGDWYCNVGNCGAHNFASRSSCFKC-----------GAFKDDLATGSGGFDCDMVXXXX 305
           RPGDW C   +C   NF  R SC +C           G+F    + GS GF    V    
Sbjct: 3   RPGDWNCR--SCQHLNFQRRDSCQRCGDPRPGERDHYGSFGGRSSGGSFGFTGPDV---- 56

Query: 306 XXXXXXXXXXXXXXWKSGDWICGRPGCNEHNFASRMECFRCNAPREPTS 452
                          + GDW C    C  HNFASR  CF+C   ++ +S
Sbjct: 57  ---------------RPGDWYCTAGNCGAHNFASRSSCFKCGVSKDESS 90


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