BLASTX nr result

ID: Atractylodes21_contig00024132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024132
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi comple...   102   2e-20
emb|CBI18625.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002316165.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
gb|ADI48326.1| putative low density lipoprotein B-like protein [...    99   5e-19
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi complex subunit 1-like [Vitis
            vinifera]
          Length = 1067

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = -1

Query: 208  LLDLRFAADILAGGDLSGNGDISKMPKTKMAFRRKQEVQETKSVIRERLDGLVNRLSQKL 29
            LLDLRF AD+L GGDL+ + D+SK  K K  FRRKQ+ ++TKS+IRER+DGLVNR SQ++
Sbjct: 818  LLDLRFVADVLCGGDLNVSDDLSKSSKVKFPFRRKQDKKQTKSIIRERVDGLVNRFSQRM 877

Query: 28   DPIDWLTYE 2
            DPIDWLTYE
Sbjct: 878  DPIDWLTYE 886


>emb|CBI18625.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 LLDLRFAADILAGGDLSGNGDISKMPKTKMAFRRKQEVQETKSVIRERLDGLVNRLSQKL 29
           LLDLRF AD+L GGDL+ + D+SK  K K  FRRKQ+ ++TKS+IRER+DGLVNR SQ++
Sbjct: 756 LLDLRFVADVLCGGDLNVSDDLSKSSKVKFPFRRKQDKKQTKSIIRERVDGLVNRFSQRM 815

Query: 28  DPIDWLTYE 2
           DPIDWLTYE
Sbjct: 816 DPIDWLTYE 824


>ref|XP_002316165.1| predicted protein [Populus trichocarpa] gi|222865205|gb|EEF02336.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 LLDLRFAADILAGGDLSGNGDISKMPKTKMAFRRKQEVQETKSVIRERLDGLVNRLSQKL 29
           LLDLRFAAD+L+GGD + N +IS+ PK K+ FRRKQE  + KSV RER+DGL+NR SQ+L
Sbjct: 30  LLDLRFAADVLSGGDCNINEEISRNPKVKVPFRRKQEQSQMKSVSRERIDGLINRFSQRL 89

Query: 28  DPIDWLTYE 2
           DPIDWLTYE
Sbjct: 90  DPIDWLTYE 98


>gb|ADI48326.1| putative low density lipoprotein B-like protein [Corchorus olitorius]
          Length = 1070

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = -1

Query: 208  LLDLRFAADILAGGDLSGNGDISKMPKTKMAFRRKQEVQETKSVIRERLDGLVNRLSQKL 29
            LLD+RFA DIL+GGD + N ++S   KTK +FRRKQ+  +TKS IRER+DGL+ RLSQKL
Sbjct: 828  LLDIRFATDILSGGDFNVNEELSSTSKTKSSFRRKQDQIQTKSFIRERVDGLIYRLSQKL 887

Query: 28   DPIDWLTYE 2
            DPIDWLTYE
Sbjct: 888  DPIDWLTYE 896


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
            predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = -1

Query: 208  LLDLRFAADILAGGDLSGNGDISKMPKTKMAFRRKQEVQETKSVIRERLDGLVNRLSQKL 29
            LLDLRFAAD+L+GGD + N +IS+ P+ K+ FRRKQE    KS  RER+DGL+N  SQ+L
Sbjct: 829  LLDLRFAADVLSGGDCNINEEISRNPRVKIPFRRKQEQSHKKSAFRERIDGLINCFSQRL 888

Query: 28   DPIDWLTYE 2
            DPIDWLTYE
Sbjct: 889  DPIDWLTYE 897


Top