BLASTX nr result

ID: Atractylodes21_contig00024101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024101
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   152   3e-35
ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]...   152   3e-35
gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isof...   152   3e-35
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   152   3e-35
ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isof...   152   3e-35

>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
            gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
            factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3    HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 182
            HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
Sbjct: 931  HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 990

Query: 183  ENCIDLVGRIADRGA 227
            ENCIDLVGRIADRGA
Sbjct: 991  ENCIDLVGRIADRGA 1005


>ref|NP_201232.1| putative splicing factor [Arabidopsis thaliana]
            gi|9759403|dbj|BAB09858.1| nuclear protein-like
            [Arabidopsis thaliana] gi|332010481|gb|AED97864.1|
            putative splicing factor [Arabidopsis thaliana]
          Length = 1269

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3    HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 182
            HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
Sbjct: 938  HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 997

Query: 183  ENCIDLVGRIADRGA 227
            ENCIDLVGRIADRGA
Sbjct: 998  ENCIDLVGRIADRGA 1012


>gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
            gi|413935578|gb|AFW70129.1| antigenic determinant of
            rec-A protein, mRNA isoform 2 [Zea mays]
            gi|413935579|gb|AFW70130.1| antigenic determinant of
            rec-A protein, mRNA isoform 3 [Zea mays]
            gi|413935580|gb|AFW70131.1| antigenic determinant of
            rec-A protein, mRNA isoform 4 [Zea mays]
          Length = 1280

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3    HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 182
            HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
Sbjct: 949  HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1008

Query: 183  ENCIDLVGRIADRGA 227
            ENCIDLVGRIADRGA
Sbjct: 1009 ENCIDLVGRIADRGA 1023


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
            gi|413926603|gb|AFW66535.1| hypothetical protein
            ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3    HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 182
            HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
Sbjct: 949  HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1008

Query: 183  ENCIDLVGRIADRGA 227
            ENCIDLVGRIADRGA
Sbjct: 1009 ENCIDLVGRIADRGA 1023


>ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isoform 1 [Brachypodium
            distachyon] gi|357147949|ref|XP_003574559.1| PREDICTED:
            splicing factor 3B subunit 1 isoform 2 [Brachypodium
            distachyon] gi|357147951|ref|XP_003574560.1| PREDICTED:
            splicing factor 3B subunit 1 isoform 3 [Brachypodium
            distachyon]
          Length = 1279

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/75 (100%), Positives = 75/75 (100%)
 Frame = +3

Query: 3    HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 182
            HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
Sbjct: 948  HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ 1007

Query: 183  ENCIDLVGRIADRGA 227
            ENCIDLVGRIADRGA
Sbjct: 1008 ENCIDLVGRIADRGA 1022


Top