BLASTX nr result

ID: Atractylodes21_contig00024072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024072
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   155   7e-36
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   152   6e-35
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   147   1e-33
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   126   3e-27
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   100   4e-19

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  155 bits (391), Expect = 7e-36
 Identities = 72/148 (48%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 KKIQLPEFYGFDPQGWISKAELYFDIQGTPADLRIRLAQLSMTGVAQHWFTVVKETHVEL 267
           KK++LP F G DP  WI++AE+YFD+Q T  D+R++LA+LSM G   HWF ++ ET  EL
Sbjct: 72  KKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDEL 131

Query: 266 TWEQFTSELLQRFGGTGIQNPYEQLSTIQQIGSIYDYIDDFEYLMS-VPRLPEAQSLGYF 90
           +WE     L+ R+GG  ++NP+E+LST++Q GS+ ++++ FE L S V RLPE Q LGYF
Sbjct: 132 SWENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYF 191

Query: 89  LAGLRDEVKRWVRLHRPATRLEVMFLAK 6
           ++GL+ +++R VR   P  R+E+M +AK
Sbjct: 192 MSGLKPQIRRRVRTLNPRNRMEMMRIAK 219


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  152 bits (383), Expect = 6e-35
 Identities = 70/148 (47%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446  KKIQLPEFYGFDPQGWISKAELYFDIQGTPADLRIRLAQLSMTGVAQHWFTVVKETHVEL 267
            KK++LP F G DP  WI++AE+YFD+Q TP D+R++L++LSM G   HWF ++ ET  +L
Sbjct: 745  KKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDL 804

Query: 266  TWEQFTSELLQRFGGTGIQNPYEQLSTIQQIGSIYDYIDDFEYLMS-VPRLPEAQSLGYF 90
            + E+    L+ R+ G  ++NP+E+LST++QIGS+ ++++ FE L S V RLPE Q LGYF
Sbjct: 805  SREKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYF 864

Query: 89   LAGLRDEVKRWVRLHRPATRLEVMFLAK 6
            ++GL+  ++R VR   P TR+++M +AK
Sbjct: 865  MSGLKAHIRRRVRTLNPTTRMQMMRIAK 892


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  147 bits (372), Expect = 1e-33
 Identities = 69/148 (46%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 KKIQLPEFYGFDPQGWISKAELYFDIQGTPADLRIRLAQLSMTGVAQHWFTVVKETHVEL 267
           KK++LP F G D   WI++ E+YFD+Q T   +R++LA+LSM G   HWF ++ ET  EL
Sbjct: 55  KKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDEL 114

Query: 266 TWEQFTSELLQRFGGTGIQNPYEQLSTIQQIGSIYDYIDDFEYLMS-VPRLPEAQSLGYF 90
           +WE+    L+ R+GG  ++NP+E+LSTI+Q GS+ ++++ FE L S V RLPE Q LGYF
Sbjct: 115 SWEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYF 174

Query: 89  LAGLRDEVKRWVRLHRPATRLEVMFLAK 6
           ++GL+ +++R VR   P  R+++M +AK
Sbjct: 175 MSGLKPQIRRRVRTLNPLNRMQMMRIAK 202


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  126 bits (317), Expect = 3e-27
 Identities = 62/133 (46%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = -3

Query: 446 KKIQLPEFYGFDPQGWISKAELYFDIQGTPADLRIRLAQLSMTGVAQHWFTVVKETHVEL 267
           KK++L  F G DP GWI++AE+YF++Q T  ++++ LAQL M G   H+F  + E +  L
Sbjct: 82  KKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETL 141

Query: 266 TWEQFTSELLQRFGGTGIQNPYEQLSTIQQIGSIYDYIDDFEYLMS-VPRLPEAQSLGYF 90
           TWE     LL+R+GG    N +EQLS +QQ G+I +YI DFE L++ +P+LP  Q LGYF
Sbjct: 142 TWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYF 201

Query: 89  LAGLRDEVKRWVR 51
           + GL+D+++  VR
Sbjct: 202 VHGLKDKIRGKVR 214


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
 Frame = -3

Query: 443 KIQLPEFYGFDPQGWISKAELYFDIQGTPADLRIRLAQLSMTGVAQHWFTVVKETHVELT 264
           K+  P+F G DP GWI KAE YFD        +++LA   + G+A  W   + +    LT
Sbjct: 84  KLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQWHRWLTKFRGPLT 143

Query: 263 WEQFTSELLQRFGGTGIQNPYEQLSTIQQIGSIYDYIDDFEYLM-SVPRLPEAQSLGYFL 87
           W++FT  +  RFG T  ++P E L+ ++Q  ++  Y + FE L   V  LPE   +G F+
Sbjct: 144 WDEFTKAVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEAFEKLSHRVDGLPENFLIGCFI 203

Query: 86  AGLRDEVKRWVRLHRPATRLEVMFLAK 6
           AGL+DE++  V++ +P T  + + +A+
Sbjct: 204 AGLQDEIRIDVKIKQPRTLADTIGVAR 230


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