BLASTX nr result

ID: Atractylodes21_contig00023990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023990
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N g...    55   7e-06
dbj|BAD12594.1| N protein [Nicotiana tabacum]                          55   7e-06
dbj|BAF95889.1| N-like protein [Nicotiana tabacum]                     55   9e-06

>sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N gi|558887|gb|AAA50763.1| N
           [Nicotiana glutinosa]
          Length = 1144

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = -1

Query: 276 PKLTGLDVSHSK--LRTFDFRLTPNLKVIYLENCYHLVELHAPVGCLKKLVGLTLSSCFS 103
           P L  +D+S SK   RT DF   PNL+ + L  C +L E+H  +GC  K++GL L+ C S
Sbjct: 619 PSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKS 678

Query: 102 FKHFVFVN 79
            K F  VN
Sbjct: 679 LKRFPCVN 686


>dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
 Frame = -1

Query: 276 PKLTGLDVSHSK--LRTFDFRLTPNLKVIYLENCYHLVELHAPVGCLKKLVGLTLSSCFS 103
           P L  +D+S SK   RT DF   PNL+ + L  C +L E+H  +GC  K++GL L+ C S
Sbjct: 611 PSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGCCSKVIGLYLNDCKS 670

Query: 102 FKHFVFVN 79
            K F  VN
Sbjct: 671 LKRFPCVN 678


>dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = -1

Query: 270 LTGLDVSHSKLRTFDFRLTPNLKVIYLENCYHLVELHAPVGCLKKLVGLTLSSCFSFKHF 91
           LTG   S S +RT DF   PNL+ + +  C++L E+H  +GC  KL+GL L+ C S K F
Sbjct: 636 LTG---SESLMRTPDFTGMPNLEYLDMSFCFNLEEVHHSLGCCSKLIGLDLTDCKSLKRF 692

Query: 90  VFVN 79
             VN
Sbjct: 693 PCVN 696


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