BLASTX nr result

ID: Atractylodes21_contig00023979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023979
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   392   e-116
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   388   e-114
ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   387   e-114
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   389   e-113
emb|CBI23476.3| unnamed protein product [Vitis vinifera]              389   e-113

>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  392 bits (1008), Expect(2) = e-116
 Identities = 185/206 (89%), Positives = 198/206 (96%)
 Frame = -2

Query: 619 WWRYLIARTESPFKKRAVIYERALKALPGSYKLWYAYLRERLELVRNLPISHTQYQTLNN 440
           WWRYLIAR E+PFKKR +IYERALKALPGSYKLWYAYLRERL+LVRNLPI+H+QY+TLNN
Sbjct: 30  WWRYLIARAEAPFKKRFIIYERALKALPGSYKLWYAYLRERLDLVRNLPITHSQYETLNN 89

Query: 439 TFERALVTMHKMPRIWIMYLTSLTEQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 260
           TFERALVTMHKMPRIWIMYL +LT QKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS
Sbjct: 90  TFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 149

Query: 259 QRGVPIETSLRVYRRYLKYDPGHIEDLIEFLLNSELWQEAAERLAGVLNDDRFYSIKGKT 80
           Q+G+PIETSLRVYRRYLKYDP HIEDLIEFL+NS LWQEAAE LA VLNDD+FYSIKGKT
Sbjct: 150 QKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNLWQEAAENLASVLNDDQFYSIKGKT 209

Query: 79  KHRLWLELCDLLTQHATEISGLNVDA 2
           KHRLWLELCDLLT+HATE+SGLNVDA
Sbjct: 210 KHRLWLELCDLLTRHATEVSGLNVDA 235



 Score = 55.1 bits (131), Expect(2) = e-116
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = -1

Query: 815 SIPSDLYPSQDDLLYEEELLRNPFSLKL 732
           SI  DLYPSQDDLLYEEELLRNPFSLKL
Sbjct: 2   SISQDLYPSQDDLLYEEELLRNPFSLKL 29


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score =  388 bits (997), Expect(2) = e-114
 Identities = 182/206 (88%), Positives = 197/206 (95%)
 Frame = -2

Query: 619 WWRYLIARTESPFKKRAVIYERALKALPGSYKLWYAYLRERLELVRNLPISHTQYQTLNN 440
           WWRYLIAR+E+PFKKR VIYERALKALPGSYKLW+AYLRERL+LVRNLP++H+QY TLNN
Sbjct: 30  WWRYLIARSEAPFKKRFVIYERALKALPGSYKLWHAYLRERLDLVRNLPVTHSQYDTLNN 89

Query: 439 TFERALVTMHKMPRIWIMYLTSLTEQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 260
           TFERALVTMHKMPRIWIMYL +LT QKLVTRTRRTFDRALCALPVTQHDRIWEPYL+FVS
Sbjct: 90  TFERALVTMHKMPRIWIMYLKTLTNQKLVTRTRRTFDRALCALPVTQHDRIWEPYLLFVS 149

Query: 259 QRGVPIETSLRVYRRYLKYDPGHIEDLIEFLLNSELWQEAAERLAGVLNDDRFYSIKGKT 80
           Q+G+PIETSLRVYRRYLKYDP HIED IEFLLNS LWQEA+ERLA VLNDD+FYSIKGKT
Sbjct: 150 QKGIPIETSLRVYRRYLKYDPSHIEDFIEFLLNSSLWQEASERLASVLNDDQFYSIKGKT 209

Query: 79  KHRLWLELCDLLTQHATEISGLNVDA 2
           KHRLWLELCDLLT+HA E+SGLNVDA
Sbjct: 210 KHRLWLELCDLLTRHANEVSGLNVDA 235



 Score = 52.8 bits (125), Expect(2) = e-114
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -1

Query: 815 SIPSDLYPSQDDLLYEEELLRNPFSLKL 732
           +I  DLYPS+DDLLYEEELLRNPFSLKL
Sbjct: 2   AIAQDLYPSEDDLLYEEELLRNPFSLKL 29


>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score =  387 bits (993), Expect(2) = e-114
 Identities = 181/206 (87%), Positives = 196/206 (95%)
 Frame = -2

Query: 619 WWRYLIARTESPFKKRAVIYERALKALPGSYKLWYAYLRERLELVRNLPISHTQYQTLNN 440
           WWRYLIAR+E+PFKKR VIYERALKALPGSYKLW+AYLRERL+LVRNLP+ H+QY TLNN
Sbjct: 30  WWRYLIARSEAPFKKRFVIYERALKALPGSYKLWHAYLRERLDLVRNLPVIHSQYDTLNN 89

Query: 439 TFERALVTMHKMPRIWIMYLTSLTEQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 260
           TFERALVTMHKMPRIWIMYL +LT QKL+TRTRRTFDRALCALPVTQHDRIWEPYLVFVS
Sbjct: 90  TFERALVTMHKMPRIWIMYLQTLTNQKLITRTRRTFDRALCALPVTQHDRIWEPYLVFVS 149

Query: 259 QRGVPIETSLRVYRRYLKYDPGHIEDLIEFLLNSELWQEAAERLAGVLNDDRFYSIKGKT 80
           Q+G+PIETSLRVYRRYLKYDP HIED IEFLLNS LWQE++ERLA VLNDD+FYSIKGKT
Sbjct: 150 QKGIPIETSLRVYRRYLKYDPSHIEDFIEFLLNSSLWQESSERLASVLNDDQFYSIKGKT 209

Query: 79  KHRLWLELCDLLTQHATEISGLNVDA 2
           KHRLWLELCDLLT+HA E+SGLNVDA
Sbjct: 210 KHRLWLELCDLLTRHANEVSGLNVDA 235



 Score = 52.4 bits (124), Expect(2) = e-114
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -1

Query: 812 IPSDLYPSQDDLLYEEELLRNPFSLKL 732
           I  DLYPS+DDLLYEEELLRNPFSLKL
Sbjct: 3   IAQDLYPSEDDLLYEEELLRNPFSLKL 29


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  389 bits (999), Expect(2) = e-113
 Identities = 182/206 (88%), Positives = 200/206 (97%)
 Frame = -2

Query: 619 WWRYLIARTESPFKKRAVIYERALKALPGSYKLWYAYLRERLELVRNLPISHTQYQTLNN 440
           WWRYLIAR++SPFKKR +IYERALKALPGSYKLWYAYLRERLE+VRNLPI H+QY+TLNN
Sbjct: 30  WWRYLIARSDSPFKKRFLIYERALKALPGSYKLWYAYLRERLEIVRNLPIKHSQYETLNN 89

Query: 439 TFERALVTMHKMPRIWIMYLTSLTEQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 260
           TFERALVTMHKMPRIWIMYL +LT+Q+L+TRTRRTFDRALCALPVTQHDRIWEPYLVFVS
Sbjct: 90  TFERALVTMHKMPRIWIMYLQTLTDQELLTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 149

Query: 259 QRGVPIETSLRVYRRYLKYDPGHIEDLIEFLLNSELWQEAAERLAGVLNDDRFYSIKGKT 80
           ++GVPIETSLRVYRRYLKYDP HIED IEFL+NS LWQEAAERLAGVLNDD+FYSIKGKT
Sbjct: 150 KKGVPIETSLRVYRRYLKYDPTHIEDFIEFLMNSGLWQEAAERLAGVLNDDQFYSIKGKT 209

Query: 79  KHRLWLELCDLLTQHATEISGLNVDA 2
           +HRLWLELCDLLT+HAT++SGLNVDA
Sbjct: 210 RHRLWLELCDLLTKHATDVSGLNVDA 235



 Score = 47.8 bits (112), Expect(2) = e-113
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 815 SIPSDLYPSQDDLLYEEELLRNPFSLKL 732
           +I  +LYPSQ+DLLYEEELLRN FSLKL
Sbjct: 2   AIAEELYPSQEDLLYEEELLRNQFSLKL 29


>emb|CBI23476.3| unnamed protein product [Vitis vinifera]
          Length = 914

 Score =  389 bits (999), Expect(2) = e-113
 Identities = 182/206 (88%), Positives = 200/206 (97%)
 Frame = -2

Query: 619 WWRYLIARTESPFKKRAVIYERALKALPGSYKLWYAYLRERLELVRNLPISHTQYQTLNN 440
           WWRYLIAR++SPFKKR +IYERALKALPGSYKLWYAYLRERLE+VRNLPI H+QY+TLNN
Sbjct: 30  WWRYLIARSDSPFKKRFLIYERALKALPGSYKLWYAYLRERLEIVRNLPIKHSQYETLNN 89

Query: 439 TFERALVTMHKMPRIWIMYLTSLTEQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 260
           TFERALVTMHKMPRIWIMYL +LT+Q+L+TRTRRTFDRALCALPVTQHDRIWEPYLVFVS
Sbjct: 90  TFERALVTMHKMPRIWIMYLQTLTDQELLTRTRRTFDRALCALPVTQHDRIWEPYLVFVS 149

Query: 259 QRGVPIETSLRVYRRYLKYDPGHIEDLIEFLLNSELWQEAAERLAGVLNDDRFYSIKGKT 80
           ++GVPIETSLRVYRRYLKYDP HIED IEFL+NS LWQEAAERLAGVLNDD+FYSIKGKT
Sbjct: 150 KKGVPIETSLRVYRRYLKYDPTHIEDFIEFLMNSGLWQEAAERLAGVLNDDQFYSIKGKT 209

Query: 79  KHRLWLELCDLLTQHATEISGLNVDA 2
           +HRLWLELCDLLT+HAT++SGLNVDA
Sbjct: 210 RHRLWLELCDLLTKHATDVSGLNVDA 235



 Score = 47.8 bits (112), Expect(2) = e-113
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 815 SIPSDLYPSQDDLLYEEELLRNPFSLKL 732
           +I  +LYPSQ+DLLYEEELLRN FSLKL
Sbjct: 2   AIAEELYPSQEDLLYEEELLRNQFSLKL 29


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