BLASTX nr result

ID: Atractylodes21_contig00023952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023952
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   244   2e-62
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   227   2e-57
ref|XP_002510115.1| transcription initiation factor, putative [R...   184   2e-44
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002520510.1| transcription initiation factor, putative [R...   175   1e-41

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  244 bits (623), Expect = 2e-62
 Identities = 141/270 (52%), Positives = 178/270 (65%), Gaps = 12/270 (4%)
 Frame = -1

Query: 775  GGNYHPGSSANMNLSSQSFKQQSHDLQMRQGPVHPSMGASQVGISTQAMNPMNLP--DRQ 602
            GGNYH  +  N+N S+ S KQQ HD QMRQ P+H ++G++Q+G ++QAMNPM++P  +RQ
Sbjct: 373  GGNYHSYTGTNVNTSATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQ 432

Query: 601  TTFSDMKRMQGGNFTHFPSNSALQQNSGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQH 422
            ++ +D KR+QGG+  H  ++S LQQ+S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ 
Sbjct: 433  SSVNDPKRVQGGSLPHPSNSSTLQQSSVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQ 490

Query: 421  KSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNFSTSMSKPEPMSITAQLER 242
            KSQLSTPQ  SSF   Q+E+G AI G  KDE+ E  +SR  FS+SMS   P S+++ +  
Sbjct: 491  KSQLSTPQSLSSFPAVQVEKGNAIPGILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGT 550

Query: 241  Q-------XXXXXXXXXXXXXXAKTPPKKPSVGQKKSLEA---XXXXXXXXXXXSGAFSD 92
                                   +TPPKKPS+GQKK LEA              SGAF D
Sbjct: 551  HLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLD 610

Query: 91   QSIEQLNDVTAVSGVNLREEEEQLFSGSKE 2
            QSIEQLNDVTAVSGVNLREEEEQLFSG KE
Sbjct: 611  QSIEQLNDVTAVSGVNLREEEEQLFSGPKE 640


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  227 bits (578), Expect = 2e-57
 Identities = 133/264 (50%), Positives = 171/264 (64%), Gaps = 12/264 (4%)
 Frame = -1

Query: 775  GGNYHPGSSANMNLSSQSFKQQSHDLQMRQGPVHPSMGASQVGISTQAMNPMNLP--DRQ 602
            GGNYH  +  N+N S+ S KQQ HD QMRQ P+H ++G++Q+G ++QAMNPM++P  +RQ
Sbjct: 418  GGNYHSYTGTNVNTSATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQ 477

Query: 601  TTFSDMKRMQGGNFTHFPSNSALQQNSGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQH 422
            ++ +D KR+QGG+  H  ++S LQQ+S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ 
Sbjct: 478  SSVNDPKRVQGGSLPHPSNSSTLQQSSVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQ 535

Query: 421  KSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNFSTSMSKPEPMSITAQLER 242
            KSQLSTPQ  SSF   Q+E+G AI G  KDE+ E  +SR  FS+SMS   P S+++ +  
Sbjct: 536  KSQLSTPQSLSSFPAVQVEKGNAIPGILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGT 595

Query: 241  Q-------XXXXXXXXXXXXXXAKTPPKKPSVGQKKSLEA---XXXXXXXXXXXSGAFSD 92
                                   +TPPKKPS+GQKK LEA              SGAF D
Sbjct: 596  HLDPNVTLGSRIPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLD 655

Query: 91   QSIEQLNDVTAVSGVNLREEEEQL 20
            QSIEQLNDVTAVSGVNLR  EE+L
Sbjct: 656  QSIEQLNDVTAVSGVNLRCVEERL 679


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score =  184 bits (467), Expect = 2e-44
 Identities = 121/271 (44%), Positives = 156/271 (57%), Gaps = 14/271 (5%)
 Frame = -1

Query: 772  GNYHPGSSANMNLSSQSFKQQSHDLQMRQGPVHPSMGASQVGISTQAMNPMNLP--DRQT 599
            G +HP S  N+N S  S K Q HDLQMRQ   H +M ++Q+G ST  +N +++   +R  
Sbjct: 373  GTHHPYSGTNINTSGSSMKTQPHDLQMRQIS-HSTMASTQIGGSTPTLNMVHVSKFERPN 431

Query: 598  TFSDMKRMQGGNFTHFPSNSALQQNSGHWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQ 425
            + SD  R+Q G+ + + + SAL QNS  WQ   +K+Q+  L  S  YVK EP++Q  DQQ
Sbjct: 432  SVSDPSRVQSGSMSQYNNKSALPQNSIPWQAPTNKEQTSPLFPSTNYVKQEPLEQATDQQ 491

Query: 424  HKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNFSTSMSKPEPMSITAQLE 245
             K QLS PQG S+ +PG  EQG A+   SK+++ E  SS+  FS   +     S++  + 
Sbjct: 492  QKPQLSNPQGLSA-APG--EQGNAVPVNSKEDSLEKPSSKVGFSNPSTAVPSNSVSPSIA 548

Query: 244  RQXXXXXXXXXXXXXXA-------KTPPKKPSVGQKKSLEAXXXXXXXXXXXS---GAFS 95
             Q              A       +TP KK S+GQKK LEA               GAF 
Sbjct: 549  IQPDPNIQAGPRFPSGAASVGVNARTPTKKLSIGQKKPLEALGSSPPMSSKKQKVSGAFL 608

Query: 94   DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE 2
            DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE
Sbjct: 609  DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE 639


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score =  177 bits (450), Expect = 2e-42
 Identities = 113/266 (42%), Positives = 146/266 (54%), Gaps = 8/266 (3%)
 Frame = -1

Query: 775  GGNYHPGSSANMNLSSQSFKQQSHDLQMRQGPVHPSMGASQVGISTQAMNPMNLPDRQTT 596
            GGNYHP S  N++ S  S K Q HD Q RQ P H ++G +Q+G    +M      +RQ +
Sbjct: 345  GGNYHPYSGTNVSTSGPSVKPQPHDPQTRQIPHHQNLGVTQIGGPMHSMISTPKFERQNS 404

Query: 595  FSDMKRMQGGNFTHFPSNSALQQNSGHWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQH 422
              D  R+  G+ +H+ + SALQQNS  WQ   ++++S    SS+ YVKP  ++Q  +QQ+
Sbjct: 405  ADDPSRVHSGSVSHYTNKSALQQNSAPWQAPSNREKSPASFSSLNYVKPGLLEQAGEQQN 464

Query: 421  KSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNFSTSMSKPEPMSITAQLE- 245
            K QLS+PQ                     D++ +  S++  FST      P SI  Q++ 
Sbjct: 465  KPQLSSPQ---------------------DQSLDKQSTKIVFSTVPPNSAPPSIATQMDP 503

Query: 244  --RQXXXXXXXXXXXXXXAKTPPKKPSVGQKKSLEA---XXXXXXXXXXXSGAFSDQSIE 80
              +               A+TPPKKPSVGQKK  EA              SGAFSDQSIE
Sbjct: 504  NGQAGSRISSVASPAGVNARTPPKKPSVGQKKPFEALGSSPPASTKKHKVSGAFSDQSIE 563

Query: 79   QLNDVTAVSGVNLREEEEQLFSGSKE 2
            QLNDVTAVSGVNLREEEEQLFSG KE
Sbjct: 564  QLNDVTAVSGVNLREEEEQLFSGPKE 589


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
            gi|223540352|gb|EEF41923.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 927

 Score =  175 bits (443), Expect = 1e-41
 Identities = 115/271 (42%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
 Frame = -1

Query: 772  GNYHPGSSANMNLSSQSFKQQSHDLQMRQGPVHPSMGASQVGISTQAMNPMNLP--DRQT 599
            G + P S  N N S  S + QSHDLQMR+   HP+ GA+Q+G S QAM+ + +   +R  
Sbjct: 340  GTHRPYSGTNFNTSGSSMRPQSHDLQMRKIS-HPTTGATQIGGSAQAMDMIKVSKFERPN 398

Query: 598  TFSDMKRMQGGNFTHFPSNSALQQNSGHWQQSMHKDQ--SLLSSMAYVKPEPVDQMNDQQ 425
            + +D  ++Q G+   + + SALQ NS  WQ   +K+Q  S   S  YVK EPV+Q  +Q 
Sbjct: 399  SGTDPNKVQSGSAAQYTNKSALQPNSAPWQPPTNKEQKSSPFPSKNYVKQEPVEQATEQH 458

Query: 424  HKSQLSTPQGPSSFSPGQLEQGGAISGPSKDETFEMLSSRPNFSTSMSKPEPMSITAQLE 245
             KSQLS PQ     S   +EQG A++   K ++ E  SS+   S   S     S++  + 
Sbjct: 459  QKSQLSNPQ---DLSAAPVEQGNAVTSNLKVDSLEKQSSKVGISIPSSMVPSSSVSTSIA 515

Query: 244  RQXXXXXXXXXXXXXXA-------KTPPKKPSVGQKKSLEAXXXXXXXXXXXSG---AFS 95
             +              A       +TPPKKP +GQKK LEA                A S
Sbjct: 516  TRLDPIIQVGSQIQSIAASPGVNARTPPKKPLIGQKKPLEALGSSPPMSSKKQKISVASS 575

Query: 94   DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE 2
            DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE
Sbjct: 576  DQSIEQLNDVTAVSGVNLREEEEQLFSGSKE 606


Top