BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023936
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   156   3e-36
ref|XP_002279990.2| PREDICTED: transcription initiation factor I...   154   1e-35
emb|CBI19782.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_002510468.1| Transcription initiation factor IIF subunit ...   152   5e-35
ref|NP_177683.1| transcription initiation factor TFIIF beta subu...   150   1e-34

>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  156 bits (394), Expect = 3e-36
 Identities = 85/129 (65%), Positives = 88/129 (68%)
 Frame = +3

Query: 3   NDRGVHMRPMPGMIGLISSNPKEKKKAAPVKGPEVKRTRRDRGELEHIMFKLFERQPNWA 182
           NDRGVHMRPMPGM+GLISS  KEKKK APVK  +VKRTRRDRGELE IMFKLFERQPNWA
Sbjct: 150 NDRGVHMRPMPGMVGLISSTSKEKKKVAPVKQSDVKRTRRDRGELEDIMFKLFERQPNWA 209

Query: 183 LKQLVVETDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNQGTYELKPEYKK 362
           LKQLV ETDQPA                                 GTNQGTYELKPEYKK
Sbjct: 210 LKQLVQETDQPA-----------------QFLKEILNELCVYNKRGTNQGTYELKPEYKK 252

Query: 363 SIEDTTGGE 389
           S+ED TGGE
Sbjct: 253 SVED-TGGE 260


>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score =  154 bits (390), Expect = 1e-35
 Identities = 81/125 (64%), Positives = 86/125 (68%)
 Frame = +3

Query: 3   NDRGVHMRPMPGMIGLISSNPKEKKKAAPVKGPEVKRTRRDRGELEHIMFKLFERQPNWA 182
           NDRGVHMRPMPGM+GLI+SN K+KKK APVKG ++KRTRRDRGELE IMFKLFERQPNWA
Sbjct: 150 NDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKRTRRDRGELEDIMFKLFERQPNWA 209

Query: 183 LKQLVVETDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNQGTYELKPEYKK 362
           LKQLV ETDQPA                                 GTNQGTYELKPEYKK
Sbjct: 210 LKQLVQETDQPA-----------------QFLKEILNELCVYNKRGTNQGTYELKPEYKK 252

Query: 363 SIEDT 377
           S EDT
Sbjct: 253 SAEDT 257


>emb|CBI19782.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  154 bits (390), Expect = 1e-35
 Identities = 81/125 (64%), Positives = 86/125 (68%)
 Frame = +3

Query: 3   NDRGVHMRPMPGMIGLISSNPKEKKKAAPVKGPEVKRTRRDRGELEHIMFKLFERQPNWA 182
           NDRGVHMRPMPGM+GLI+SN K+KKK APVKG ++KRTRRDRGELE IMFKLFERQPNWA
Sbjct: 149 NDRGVHMRPMPGMVGLIASNSKDKKKTAPVKGSDMKRTRRDRGELEDIMFKLFERQPNWA 208

Query: 183 LKQLVVETDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNQGTYELKPEYKK 362
           LKQLV ETDQPA                                 GTNQGTYELKPEYKK
Sbjct: 209 LKQLVQETDQPA-----------------QFLKEILNELCVYNKRGTNQGTYELKPEYKK 251

Query: 363 SIEDT 377
           S EDT
Sbjct: 252 SAEDT 256


>ref|XP_002510468.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223551169|gb|EEF52655.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 257

 Score =  152 bits (384), Expect = 5e-35
 Identities = 81/127 (63%), Positives = 86/127 (67%)
 Frame = +3

Query: 3   NDRGVHMRPMPGMIGLISSNPKEKKKAAPVKGPEVKRTRRDRGELEHIMFKLFERQPNWA 182
           NDRGVHMRPMPGM+GLISS+ K+KKK APVK  ++KRTRRDRGELE IMFKLFERQPNWA
Sbjct: 147 NDRGVHMRPMPGMVGLISSSSKDKKKTAPVKQSDMKRTRRDRGELEDIMFKLFERQPNWA 206

Query: 183 LKQLVVETDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNQGTYELKPEYKK 362
           LKQLV ETDQPA                                 GTNQGTYELKPEYKK
Sbjct: 207 LKQLVQETDQPA-----------------QFLKEILNELCVYNKRGTNQGTYELKPEYKK 249

Query: 363 SIEDTTG 383
           S EDT G
Sbjct: 250 SAEDTGG 256


>ref|NP_177683.1| transcription initiation factor TFIIF beta subunit [Arabidopsis
           thaliana] gi|9369371|gb|AAF87120.1|AC006434_16 F10A5.27
           [Arabidopsis thaliana]
           gi|11692842|gb|AAG40024.1|AF324673_1 At1g75700
           [Arabidopsis thaliana]
           gi|11935195|gb|AAG42013.1|AF327423_1 putative
           transcription initiation factor [Arabidopsis thaliana]
           gi|12642908|gb|AAK00396.1|AF339714_1 putative
           transcription initiation factor [Arabidopsis thaliana]
           gi|39545896|gb|AAR28011.1| TFIIF-beta 2 [Arabidopsis
           thaliana] gi|110741044|dbj|BAE98616.1| putative
           transcription initiation factor [Arabidopsis thaliana]
           gi|332197607|gb|AEE35728.1| transcription initiation
           factor TFIIF beta subunit [Arabidopsis thaliana]
          Length = 261

 Score =  150 bits (380), Expect = 1e-34
 Identities = 80/129 (62%), Positives = 85/129 (65%)
 Frame = +3

Query: 3   NDRGVHMRPMPGMIGLISSNPKEKKKAAPVKGPEVKRTRRDRGELEHIMFKLFERQPNWA 182
           NDRGVHMRPMPGM+GL+SSN KEK+K  PVK  EVKRTRRDRGELE IMFKLFE QPNW 
Sbjct: 150 NDRGVHMRPMPGMLGLVSSNSKEKRKPPPVKQTEVKRTRRDRGELEAIMFKLFEGQPNWT 209

Query: 183 LKQLVVETDQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTNQGTYELKPEYKK 362
           LKQLV ETDQPA                                 G+NQGTYELKPEYKK
Sbjct: 210 LKQLVQETDQPA-----------------QFLKEILNELCVYNKRGSNQGTYELKPEYKK 252

Query: 363 SIEDTTGGE 389
           S ED TGG+
Sbjct: 253 SAEDDTGGQ 261