BLASTX nr result

ID: Atractylodes21_contig00023919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023919
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002313804.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002313805.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|ABK96058.1| unknown [Populus trichocarpa]                           57   1e-06
gb|ABD98040.1| epicotyl-specific tissue protein [Striga asiatica]      53   2e-06

>ref|XP_002313801.1| predicted protein [Populus trichocarpa] gi|222850209|gb|EEE87756.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVY 347
           E+FEP PN+SVYD+G GLKGKK+F +EFEPRP+V+ Y
Sbjct: 149 EDFEPGPNVSVYDDGVGLKGKKSFSDEFEPRPSVTAY 185



 Score = 56.6 bits (135), Expect(2) = 8e-07
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVYD 344
           E+ EPRPN+SVY +   LKG+ +F E+FEP PNVSVYD
Sbjct: 124 EDLEPRPNVSVYHDDAALKGENSFPEDFEPGPNVSVYD 161



 Score = 21.2 bits (43), Expect(2) = 8e-07
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 231 EAFEPRPNISVY 196
           + FEPRP+++ Y
Sbjct: 174 DEFEPRPSVTAY 185


>ref|XP_002313804.1| predicted protein [Populus trichocarpa] gi|222850212|gb|EEE87759.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVS 353
           E+FEP PN+SVYD+G GLKGKK+F ++FEPRP+V+
Sbjct: 150 EDFEPGPNVSVYDDGVGLKGKKSFSDDFEPRPSVT 184



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVYD 344
           E+ EPRPN+SVY +   LKG+ +F E+FEP PNVSVYD
Sbjct: 125 EDLEPRPNVSVYHDDAALKGENSFPEDFEPGPNVSVYD 162


>ref|XP_002313805.1| predicted protein [Populus trichocarpa] gi|222850213|gb|EEE87760.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVYD 344
           E+ EPRPN+SVY +   LKG+K+F E+FEP PN+SVYD
Sbjct: 123 EDVEPRPNVSVYHDDATLKGEKSFQEDFEPGPNISVYD 160


>gb|ABK96058.1| unknown [Populus trichocarpa]
          Length = 188

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVYD 344
           E+ EPRPN+SVY +   LKG+K+F E+FEP PN+SVYD
Sbjct: 124 EDLEPRPNVSVYHDDATLKGEKSFPEDFEPGPNISVYD 161


>gb|ABD98040.1| epicotyl-specific tissue protein [Striga asiatica]
          Length = 166

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVY 347
           ++FEPRPN+S Y N   L   K+FD++FEPRPNVS Y
Sbjct: 79  KDFEPRPNISAYTNEAKLGDDKSFDKDFEPRPNVSAY 115



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 225 FEPRPNISVY 196
           FEPRPN+S Y
Sbjct: 131 FEPRPNVSAY 140



 Score = 50.8 bits (120), Expect(2) = 5e-06
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -1

Query: 457 EEFEPRPNLSVYDNGTGLKGKKTFDEEFEPRPNVSVY 347
           ++FEPRPN+S Y +   L   K+FD++FEPRPNVS Y
Sbjct: 4   KDFEPRPNISAYTDEAKLGDDKSFDKDFEPRPNVSAY 40



 Score = 24.3 bits (51), Expect(2) = 5e-06
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 225 FEPRPNISVY 196
           FEPRPNIS Y
Sbjct: 81  FEPRPNISAY 90


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