BLASTX nr result

ID: Atractylodes21_contig00023891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023891
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...    55   5e-06
ref|XP_003545998.1| PREDICTED: uncharacterized protein LOC100803...    55   6e-06

>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
 Frame = +2

Query: 47  VVEFFVLG--CTGIVMFLHGANFMFHALAHQISIRAL 151
           VVE FVLG  CTG+VMFLHGANF FH L+H ++ R+L
Sbjct: 2   VVEIFVLGMGCTGVVMFLHGANFFFHVLSHHLAFRSL 38


>ref|XP_003545998.1| PREDICTED: uncharacterized protein LOC100803709 [Glycine max]
          Length = 45

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +2

Query: 47  VVEFFVLGCTGIVMFLHGANFMFHALAHQISIR--ALSFLGCV 169
           ++E  VLGCTG+V+FLHGA+F FHAL   I++R  +LSFLG V
Sbjct: 1   MMEVLVLGCTGVVVFLHGAHFFFHALTQHIALRSLSLSFLGFV 43


Top