BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023875
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   325   1e-86
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   309   6e-82
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   306   4e-81
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   283   5e-74

>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  325 bits (833), Expect = 1e-86
 Identities = 154/193 (79%), Positives = 175/193 (90%)
 Frame = +1

Query: 1   DEMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHV 180
           +EMIG G+LPSVATYNAFIQVLCKKDNVENAI VFEEML+KGY PNSTTYNVVIRGLCHV
Sbjct: 258 NEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 317

Query: 181 GKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSY 360
           G+M+KA+E++ RMK DECEPNVQ YNV+IRY+CD  EIEK L VF++MG  +CLPNLD+Y
Sbjct: 318 GRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTY 377

Query: 361 NILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRA 540
           NILI AMFVRK+SD L+ AGKLLIEMV+RGF+PRKFTFNR+L+GLLLTGNQDFAKEILR 
Sbjct: 378 NILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRL 437

Query: 541 QSRCGRLPRHFRL 579
           QSRCGRLPR  +L
Sbjct: 438 QSRCGRLPRRLKL 450



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 46/172 (26%), Positives = 88/172 (51%)
 Frame = +1

Query: 19  GILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKA 198
           G +  + ++N  + VLCK   VE A    +  L K +      + ++++G    G++ +A
Sbjct: 166 GCVQDLNSFNTILDVLCKSKRVEMA----DNKLFKVFRGR---FRILLKGFFRAGQLKEA 218

Query: 199 LEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGA 378
            E+  +MK  +CE +V TY  ++  +   GE+ K+ +VF  M     LP++ +YN  I  
Sbjct: 219 WEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQV 278

Query: 379 MFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEIL 534
           +    + D++  A  +  EM+ +G++P   T+N ++ GL   G  + A E +
Sbjct: 279 LC---KKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFM 327


>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  315 bits (806), Expect = 1e-83
 Identities = 146/193 (75%), Positives = 174/193 (90%)
 Frame = +1

Query: 1   DEMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHV 180
           D M+  G+LPSVATYNAFIQVLCKKDNV+NAIV+FEEM+ KGY PNS TYN+VIRGLCH 
Sbjct: 299 DTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHR 358

Query: 181 GKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSY 360
           G+M++A+E++ RMK D CEPNVQTYN++IRY+CDEGEI+K+L +F++M +G+CLPNLD+Y
Sbjct: 359 GEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTY 418

Query: 361 NILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRA 540
           NILI AMFVRK+SDDL+VAG LLIEMVDRGF+PRKFTFNR+LNGLLLTGNQ FAKEILR 
Sbjct: 419 NILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRL 478

Query: 541 QSRCGRLPRHFRL 579
           QSRCGRL R  +L
Sbjct: 479 QSRCGRLTRKIKL 491



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
 Frame = +1

Query: 19  GILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKA 198
           G    + ++N  + VLCK   VE A  +F+ + K  +  +  +YNV++ G C + + +KA
Sbjct: 166 GCFQDLQSFNTILDVLCKSKRVEMAYNLFK-VFKGKFRADCVSYNVMVNGWCLIKRTNKA 224

Query: 199 LEYLD-----------------------------------RMKHDECEPNVQTYNVIIRY 273
           LE L                                     MK  +CE +V TY  +I  
Sbjct: 225 LEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHG 284

Query: 274 YCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFVRKRSDDLMVAGKLLIEMVDRGF 453
           +   GEI+++ KVF  M     LP++ +YN  I  +  +   D+ +V   +  EMV +G+
Sbjct: 285 FGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIV---IFEEMVVKGY 341

Query: 454 IPRKFTFNRILNGLLLTGNQDFAKEIL 534
           +P   T+N ++ GL   G  + A E +
Sbjct: 342 VPNSITYNLVIRGLCHRGEMERAMEFM 368


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  309 bits (792), Expect = 6e-82
 Identities = 146/193 (75%), Positives = 172/193 (89%)
 Frame = +1

Query: 1   DEMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHV 180
           +EM+G GILPS ATYNA IQVLCKKD+VENA+++FEEM+KKGY PN TTYNVVIRGL H 
Sbjct: 311 NEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHA 370

Query: 181 GKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSY 360
           G MDKA+E+++RMK D CEPNVQTYNV IRY+CD G++EK L +F++MG G  LPNLD+Y
Sbjct: 371 GNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGS-LPNLDTY 429

Query: 361 NILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRA 540
           N+LI AMFVRK+S+DL+VAGKLL+EMVDRGFIPRKFTFNR+LNGLLLTGNQ FAKEILR 
Sbjct: 430 NVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 489

Query: 541 QSRCGRLPRHFRL 579
           QS+CGRLPR F+L
Sbjct: 490 QSKCGRLPRQFKL 502



 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 56/177 (31%), Positives = 92/177 (51%)
 Frame = +1

Query: 34  VATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKALEYLD 213
           V +YN      C       A+ V +EM+++G TP  TTYN++++G    G++ +A E+  
Sbjct: 217 VVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFL 276

Query: 214 RMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFVRK 393
           +MK  E E +V TY  ++  +   GEI+++ KVF  M     LP+  +YN +I  +    
Sbjct: 277 QMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC--- 333

Query: 394 RSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRAQSRCGRLP 564
           + D +  A  +  EMV +G++P   T+N ++ GL   GN D A E +      G  P
Sbjct: 334 KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEP 390



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 35/159 (22%), Positives = 74/159 (46%)
 Frame = +1

Query: 31  SVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKALEYL 210
           S ++++  I +  +  + +    +   M  +   P+S T+ ++       GK D+A++  
Sbjct: 111 SASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVF 170

Query: 211 DRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFVR 390
             M+   C  ++ ++N I+   C    +E +     ++  G+   ++ SYNI+     + 
Sbjct: 171 LSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLI 230

Query: 391 KRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTG 507
           KR+   +   ++L EMV+RG  P   T+N +L G    G
Sbjct: 231 KRTPKAL---EVLKEMVERGLTPTITTYNILLKGYFRAG 266



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 42/179 (23%), Positives = 80/179 (44%)
 Frame = +1

Query: 28  PSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKALEY 207
           PS  T+    +        + AI VF  M + G   +  ++N ++  LC   +++ A   
Sbjct: 145 PSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNN 204

Query: 208 LDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFV 387
           L ++   + + +V +YN+I   +C      K+L+V K M      P + +YNIL+   F 
Sbjct: 205 LFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYF- 263

Query: 388 RKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRAQSRCGRLP 564
             R+  L  A +  ++M +R       T+  +++G  + G    A+++       G LP
Sbjct: 264 --RAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILP 320


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  306 bits (785), Expect = 4e-81
 Identities = 138/193 (71%), Positives = 173/193 (89%)
 Frame = +1

Query: 1   DEMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHV 180
           ++M+  G+LPSVAT+NA IQ+LCKKD+VENAI++FEEM+K+GY PNS TYN+VIRGLCHV
Sbjct: 290 NQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHV 349

Query: 181 GKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSY 360
           G+M +A+E ++RM+ D+CEPNVQTYN++IRY+CD GEIEK L +F++MG G+CLPNLD+Y
Sbjct: 350 GEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTY 409

Query: 361 NILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRA 540
           NILI +MFVRK SD+L+VAGKLL+EMVDRGF+PRK TFNR+L+GLLLTGNQDFAKEIL  
Sbjct: 410 NILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSL 469

Query: 541 QSRCGRLPRHFRL 579
           Q  CGRLPR F+L
Sbjct: 470 QGGCGRLPRKFKL 482



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 50/165 (30%), Positives = 88/165 (53%)
 Frame = +1

Query: 40  TYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKALEYLDRM 219
           +YN  +   C       A+ + +EM+++G TPN TTYN+++ G    G+ ++A  +   M
Sbjct: 198 SYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEM 257

Query: 220 KHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFVRKRS 399
           K  +C+ +V TY  +I      GEI+++  VF +M     LP++ ++N LI  +    + 
Sbjct: 258 KKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILC---KK 314

Query: 400 DDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEIL 534
           D +  A  +  EMV RG++P   T+N ++ GL   G    A E++
Sbjct: 315 DSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELM 359


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  283 bits (724), Expect = 5e-74
 Identities = 136/194 (70%), Positives = 167/194 (86%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1   DEMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHV 180
           DEMI  G+LPSVATYNA IQVLCKKDNVENA+V+FEEM+++GY PN TTYNV+IRGL H 
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348

Query: 181 GKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSY 360
           G+  +  E + RM+++ CEPN QTYN++IRYY +  E+EK+L +F++MG+G+CLPNLD+Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408

Query: 361 NILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRA 540
           NILI  MFVRKRS+D++VAGKLL+EMV+RGFIPRKFTFNR+LNGLLLTGNQ FAKEILR 
Sbjct: 409 NILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRL 468

Query: 541 QSRCG-RLPRHFRL 579
           QS+ G RL R FRL
Sbjct: 469 QSKSGSRLLRKFRL 482



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 53/175 (30%), Positives = 90/175 (51%)
 Frame = +1

Query: 40  TYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVGKMDKALEYLDRM 219
           TYN  +   C       A+ V +EM+++G  PN TTYN +++G    G++  A E+   M
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256

Query: 220 KHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYNILIGAMFVRKRS 399
           K  +CE +V TY  ++  +   GEI+++  VF  M     LP++ +YN +I  +    + 
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC---KK 313

Query: 400 DDLMVAGKLLIEMVDRGFIPRKFTFNRILNGLLLTGNQDFAKEILRAQSRCGRLP 564
           D++  A  +  EMV RG+ P   T+N ++ GL   G     +E+++     G  P
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 44/161 (27%), Positives = 80/161 (49%)
 Frame = +1

Query: 4   EMIGAGILPSVATYNAFIQVLCKKDNVENAIVVFEEMLKKGYTPNSTTYNVVIRGLCHVG 183
           EM+  GI P++ TYN  ++   +   + +A   F EM K+    +  TY  V+ G    G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279

Query: 184 KMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKVFKRMGTGECLPNLDSYN 363
           ++ +A    D M  +   P+V TYN +I+  C +  +E ++ +F+ M      PN+ +YN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339

Query: 364 ILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRIL 486
           +LI  +F    + +     +L+  M + G  P   T+N ++
Sbjct: 340 VLIRGLF---HAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 33/125 (26%), Positives = 62/125 (49%)
 Frame = +1

Query: 133 PNSTTYNVVIRGLCHVGKMDKALEYLDRMKHDECEPNVQTYNVIIRYYCDEGEIEKSLKV 312
           P+  T+ +V       GK DKA++    M    C  ++ ++N I+   C    +EK+ ++
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183

Query: 313 FKRMGTGECLPNLDSYNILIGAMFVRKRSDDLMVAGKLLIEMVDRGFIPRKFTFNRILNG 492
           F+ +  G    +  +YN+++    + KR+   +   ++L EMV+RG  P   T+N +L G
Sbjct: 184 FRAL-RGRFSVDTVTYNVILNGWCLIKRTPKAL---EVLKEMVERGINPNLTTYNTMLKG 239

Query: 493 LLLTG 507
               G
Sbjct: 240 FFRAG 244