BLASTX nr result

ID: Atractylodes21_contig00023852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023852
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111
ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subs...   407   e-111
ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vi...   405   e-110
ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-lik...   403   e-110

>ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|222865683|gb|EEF02814.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  416 bits (1069), Expect = e-114
 Identities = 218/321 (67%), Positives = 242/321 (75%), Gaps = 5/321 (1%)
 Frame = -2

Query: 1289 AFLTHFPVAPVHHHSSSLFTRFFLSPKPKTLLILSALSSPETLTXXXXXXXXXXXXXXPE 1110
            +  TH   +P  H +  L T+  LS        LS L S  T T               E
Sbjct: 12   SIFTHPLPSPYTHINLPLITKLKLST-------LSRLKSTVTTTEPIPFT---------E 55

Query: 1109 TLQVISLPEETPLQISLDKLFIPPETEIS-----SEKPPRILKGSNIVLSKYARDAQVIS 945
               +++L E+T  Q SLDKLFIPP+TE+S     S    R+LKGSNIVLSKYARDAQ++ 
Sbjct: 56   AHNLLALQEQTQTQFSLDKLFIPPDTEVSVNENSSGLSARVLKGSNIVLSKYARDAQIVQ 115

Query: 944  ADFVKSSVETEACPSDGSPEFALVGRSNVGKSSLLNSIVKRKKLALTSKKPGKTQCINHF 765
            A+F+KSSV TE CPSDG PEFALVGRSNVGKSSLLNSIV+RKKLALTSKKPGKTQCINHF
Sbjct: 116  AEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHF 175

Query: 764  RINDSWYLVDLPGYGYASAPHELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLE 585
            ++NDSWYLVDLPGYGYASAP ELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLE
Sbjct: 176  KVNDSWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLE 235

Query: 584  YASWLGQNQVPMTLVFTXXXXXXXXXXXXKHPEENVQDFQELIREYFEAVPPWIMTSSVT 405
            YASWLGQNQVPMTL+FT            K PEENV +FQELIR++FE  PPWIMTS VT
Sbjct: 236  YASWLGQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPWIMTSGVT 295

Query: 404  NQGRDEILLHMSQLRNYWLKH 342
            NQGRDE+LLHM+QLRNYWLKH
Sbjct: 296  NQGRDEMLLHMAQLRNYWLKH 316


>ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|222854596|gb|EEE92143.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  408 bits (1049), Expect = e-111
 Identities = 210/290 (72%), Positives = 229/290 (78%), Gaps = 4/290 (1%)
 Frame = -2

Query: 1199 LLILSALSSPETLTXXXXXXXXXXXXXXPETLQVISLPEETPLQISLDKLFIPPETEIS- 1023
            L +L+ L  P TLT               E    ++  EET  Q SLDKLFIPP+TE+S 
Sbjct: 23   LPLLTKLKLP-TLTRLKSTLTTTEPIPITEAHNFLTPQEETQTQFSLDKLFIPPDTEVSI 81

Query: 1022 ---SEKPPRILKGSNIVLSKYARDAQVISADFVKSSVETEACPSDGSPEFALVGRSNVGK 852
               S    RILKGSNIVLSKYAR+AQV+ A+F+KSSV TE CPSDG PEFALVGRSNVGK
Sbjct: 82   NENSGLSARILKGSNIVLSKYARNAQVVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGK 141

Query: 851  SSLLNSIVKRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPHELRTDWNKFT 672
            SSLLNS+V+RKKLALTSKKPGKTQCINHF++NDSWYLVDLPGYGYASAP ELRTDWNKFT
Sbjct: 142  SSLLNSLVRRKKLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYASAPQELRTDWNKFT 201

Query: 671  KDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQVPMTLVFTXXXXXXXXXXXXKH 492
            KDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQVPMT +FT            K 
Sbjct: 202  KDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQVPMTFIFTKCDKRKKKRNGGKR 261

Query: 491  PEENVQDFQELIREYFEAVPPWIMTSSVTNQGRDEILLHMSQLRNYWLKH 342
            PEENV +FQELIR +FE  PPWIMTS VTNQGRDE+LLHM+QLRNYWLKH
Sbjct: 262  PEENVNEFQELIRGFFETAPPWIMTSGVTNQGRDEMLLHMAQLRNYWLKH 311


>ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319353|gb|EFH49775.1| GTP binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 318

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/252 (78%), Positives = 221/252 (87%), Gaps = 4/252 (1%)
 Frame = -2

Query: 1085 EETPLQISLDKLFIPPETEISSEKPP----RILKGSNIVLSKYARDAQVISADFVKSSVE 918
            ++ P++ISLDKLFIPPET+IS E       RILKGSNIVLSKYARDAQV+ AD+VKSSV+
Sbjct: 67   DDAPVEISLDKLFIPPETDISGEDSTSLTARILKGSNIVLSKYARDAQVVQADYVKSSVK 126

Query: 917  TEACPSDGSPEFALVGRSNVGKSSLLNSIVKRKKLALTSKKPGKTQCINHFRINDSWYLV 738
            TE CP+DG PEFALVGRSNVGKSSLLNS+V+RK+LALTSKKPGKTQCINHFRIND WYLV
Sbjct: 127  TEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDKWYLV 186

Query: 737  DLPGYGYASAPHELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQ 558
            DLPGYGYASAPHEL+ DWNKFTKDYFLNRSTLVSVFLL+DASIP K+IDLEYASWLGQNQ
Sbjct: 187  DLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYASWLGQNQ 246

Query: 557  VPMTLVFTXXXXXXXXXXXXKHPEENVQDFQELIREYFEAVPPWIMTSSVTNQGRDEILL 378
            VPMTL+FT            K PEEN+++FQ+LI+ +FE  PPWIMTSSVTNQGRDEILL
Sbjct: 247  VPMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQGRDEILL 306

Query: 377  HMSQLRNYWLKH 342
            HM+QLRNYWLKH
Sbjct: 307  HMAQLRNYWLKH 318


>ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vitis vinifera]
            gi|296081893|emb|CBI20898.3| unnamed protein product
            [Vitis vinifera]
          Length = 307

 Score =  405 bits (1041), Expect = e-110
 Identities = 214/309 (69%), Positives = 239/309 (77%), Gaps = 6/309 (1%)
 Frame = -2

Query: 1250 HSSSLFTRFFLSPKPKTLLI--LSALSSPE-TLTXXXXXXXXXXXXXXPETLQVISLPEE 1080
            H   L T FF+S  P +L    LS L  P+ TLT              P     IS P+ 
Sbjct: 5    HLPKLHTHFFISTPPPSLYTHHLSLLRIPKSTLTTAATAATSSTTHPPP-----ISTPD- 58

Query: 1079 TPLQISLDKLFIPPETEISSEKPP---RILKGSNIVLSKYARDAQVISADFVKSSVETEA 909
            T +QI L  LF+PPET+IS+   P   RILKGSNIVLSKYA DAQV+ A+FVKSSV TE 
Sbjct: 59   THIQIPLQNLFVPPETDISATSTPLTARILKGSNIVLSKYANDAQVVQAEFVKSSVRTED 118

Query: 908  CPSDGSPEFALVGRSNVGKSSLLNSIVKRKKLALTSKKPGKTQCINHFRINDSWYLVDLP 729
            CPSDG PEFALVGRSNVGKSSLLNS+V+RK+LALTSKKPGKTQCINHFRINDSWYLVDLP
Sbjct: 119  CPSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRINDSWYLVDLP 178

Query: 728  GYGYASAPHELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQVPM 549
            GYGYA+AP ELRTDWNKFTKDYF +RSTLVSVFLL+DASIPAKKIDLEYASWLG+NQ+PM
Sbjct: 179  GYGYAAAPQELRTDWNKFTKDYFQSRSTLVSVFLLVDASIPAKKIDLEYASWLGENQIPM 238

Query: 548  TLVFTXXXXXXXXXXXXKHPEENVQDFQELIREYFEAVPPWIMTSSVTNQGRDEILLHMS 369
            TL+FT            K PEENV+DFQ LIR++F+  PPWIMTSSV+NQGRDEILLHM+
Sbjct: 239  TLIFTKCDKRKKKKNGGKRPEENVEDFQGLIRDFFQTAPPWIMTSSVSNQGRDEILLHMA 298

Query: 368  QLRNYWLKH 342
            QLRNYWLKH
Sbjct: 299  QLRNYWLKH 307


>ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
          Length = 316

 Score =  403 bits (1035), Expect = e-110
 Identities = 211/321 (65%), Positives = 240/321 (74%), Gaps = 1/321 (0%)
 Frame = -2

Query: 1301 LSTMAFLTHFPVAPVHHHSSSLFTRFFLSPKPKTLLILSALSSPE-TLTXXXXXXXXXXX 1125
            LS ++ + +F      H + SLF +   + KP    I++A  +P  T T           
Sbjct: 3    LSHLSRINNFLFTSPIHRNFSLFAK---TNKP----IIAATGAPILTSTPFPVPKSTLTA 55

Query: 1124 XXXPETLQVISLPEETPLQISLDKLFIPPETEISSEKPPRILKGSNIVLSKYARDAQVIS 945
                   +    PEET L IS +KLF+PP+T+IS     RILKGSNIVL +YARDAQV  
Sbjct: 56   AEPIPITEFTEYPEETQLPISPEKLFVPPDTDISGGGGARILKGSNIVLGRYARDAQVSQ 115

Query: 944  ADFVKSSVETEACPSDGSPEFALVGRSNVGKSSLLNSIVKRKKLALTSKKPGKTQCINHF 765
            ADFVKSSV TE CPSDG PEFALVGRSNVGKSSLLNS+V+RKKLALTSKKPGKTQCINHF
Sbjct: 116  ADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHF 175

Query: 764  RINDSWYLVDLPGYGYASAPHELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLE 585
            RINDSWYLVDLPGYGYA+AP ELRTDWNKFT+DYFLNRSTLVSVFLLIDASIPAK IDL+
Sbjct: 176  RINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRSTLVSVFLLIDASIPAKPIDLD 235

Query: 584  YASWLGQNQVPMTLVFTXXXXXXXXXXXXKHPEENVQDFQELIREYFEAVPPWIMTSSVT 405
            YASWLGQNQ+PMT++FT            K PEENV DFQELI  +F+  PPWIMTSSVT
Sbjct: 236  YASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVSDFQELISGFFQTTPPWIMTSSVT 295

Query: 404  NQGRDEILLHMSQLRNYWLKH 342
            +QGRDEILLH++QLRNYWLKH
Sbjct: 296  HQGRDEILLHIAQLRNYWLKH 316


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