BLASTX nr result

ID: Atractylodes21_contig00023850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023850
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   194   4e-47
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   176   1e-41
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   169   1e-39
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   167   3e-39
ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M...   167   3e-39

>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  194 bits (492), Expect = 4e-47
 Identities = 105/190 (55%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
 Frame = -2

Query: 874 SPAPSGLLVRNISLDSRPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 695
           SPAPSGLLVRNI+LD+RPEDLR+PFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA
Sbjct: 40  SPAPSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 99

Query: 694 EAKHQLNHCVIGGREIAIVYAEENRKTPREMRTTTQT--XXXXXXXXXXXXXXXXXXXXX 521
           EAKH LNH VIGGREIAIV+AEENRKTP+EMRT ++                        
Sbjct: 100 EAKHHLNHSVIGGREIAIVFAEENRKTPQEMRTNSRVSGRHGGSYRRRSPPRSPRRRYRS 159

Query: 520 XXXXXXXXXRDFSDRDHKXXXXXXXXXXXXXXXXXSPHDARTYKSRHYSTSPGRNGRGPT 341
                     D  DRD                   SP D + Y+S H S SP +N + P 
Sbjct: 160 YSRSPSPVRHDSRDRDRGGRDYYSPSRSRSVSRSVSPRDDKHYRSNHNSKSPRQNDQSPR 219

Query: 340 DKMYSGSDQR 311
                GSD+R
Sbjct: 220 SNRDRGSDKR 229


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  176 bits (445), Expect = 1e-41
 Identities = 84/97 (86%), Positives = 91/97 (93%)
 Frame = -2

Query: 874 SPAPSGLLVRNISLDSRPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 695
           SPAPSGLLVRN+ LD+RPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFR AEDAA
Sbjct: 46  SPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAA 105

Query: 694 EAKHQLNHCVIGGREIAIVYAEENRKTPREMRTTTQT 584
           EAK QLNH VIGGREI IV+AEENRKTP+EMR T+++
Sbjct: 106 EAKQQLNHTVIGGREIRIVFAEENRKTPQEMRVTSRS 142


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  169 bits (427), Expect = 1e-39
 Identities = 79/96 (82%), Positives = 89/96 (92%)
 Frame = -2

Query: 874 SPAPSGLLVRNISLDSRPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 695
           SPAPSGLLVRN+ LD+RPEDLR PFE++GPVKDVYLPKNYYTGEPRGFGFVK+R AEDAA
Sbjct: 48  SPAPSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAA 107

Query: 694 EAKHQLNHCVIGGREIAIVYAEENRKTPREMRTTTQ 587
           EAK ++NH +IGGREI IVYAEENRKTP+EMRTT +
Sbjct: 108 EAKQRMNHKIIGGREIRIVYAEENRKTPQEMRTTAR 143


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/95 (82%), Positives = 87/95 (91%)
 Frame = -2

Query: 874 SPAPSGLLVRNISLDSRPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 695
           SP PSGLLVRN+ LD+RPEDLR PFER+GPVKDVYLP+NYYTGEPRGFGFVK+R+ EDAA
Sbjct: 44  SPLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAA 103

Query: 694 EAKHQLNHCVIGGREIAIVYAEENRKTPREMRTTT 590
           EAK QLNH +IGGREI IV+AEENRKTP+EMR TT
Sbjct: 104 EAKQQLNHTIIGGREIRIVFAEENRKTPQEMRVTT 138


>ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510620|gb|AES91762.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 314

 Score =  167 bits (424), Expect = 3e-39
 Identities = 78/95 (82%), Positives = 87/95 (91%)
 Frame = -2

Query: 874 SPAPSGLLVRNISLDSRPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAA 695
           SP PSGLLVRN+ LD+RPEDLR PFER+GPVKDVYLP+NYYTGEPRGFGFVK+R+ EDAA
Sbjct: 44  SPLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAA 103

Query: 694 EAKHQLNHCVIGGREIAIVYAEENRKTPREMRTTT 590
           EAK QLNH +IGGREI IV+AEENRKTP+EMR TT
Sbjct: 104 EAKQQLNHTIIGGREIRIVFAEENRKTPQEMRVTT 138


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