BLASTX nr result

ID: Atractylodes21_contig00023846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023846
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polypro...    84   1e-14
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    84   1e-14
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]       80   3e-13
ref|XP_002519625.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...    76   3e-12

>dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 127

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +1

Query: 1   DLVMVHLRKERVPVGTYNKLKMKKFGPCKVVRKVNDNAYVIDLPEQMSISPTFNVADLTE 180
           D VMV LRK R  VGTYNK+K +K+GP KV+RK+NDNAYV+ LP+ M+IS TFNVAD+ E
Sbjct: 40  DDVMVLLRKGRFAVGTYNKVKPRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHE 99

Query: 181 FIED 192
           +  D
Sbjct: 100 YHAD 103


>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +1

Query: 1   DLVMVHLRKERVPVGTYNKLKMKKFGPCKVVRKVNDNAYVIDLPEQMSISPTFNVADLTE 180
           D VMV LRK R  VGTYNK+K +K+GP KV+RK+NDNAYV+ LP+ M+IS TFNVAD+ E
Sbjct: 193 DDVMVLLRKGRFAVGTYNKVKPRKYGPFKVLRKINDNAYVVALPKSMNISNTFNVADIHE 252

Query: 181 FIED 192
           +  D
Sbjct: 253 YHAD 256


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +1

Query: 1   DLVMVHLRKERVPVGTYNKLKMKKFGPCKVVRKVNDNAYVIDLPEQMSISPTFNVADLTE 180
           DLVM+HLRK R P GTYNKLK ++ GP +V+ K+ DNAY I+LP  +++ P FNVADL +
Sbjct: 346 DLVMIHLRKIRFPTGTYNKLKDRQLGPFRVLEKIGDNAYRIELPLDLNVHPIFNVADLKQ 405

Query: 181 F 183
           +
Sbjct: 406 Y 406


>ref|XP_002519625.1| conserved hypothetical protein [Ricinus communis]
           gi|223541215|gb|EEF42770.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +1

Query: 1   DLVMVHLRKERVPVGTYNKLKMKKFGPCKVVRKVNDNAYVIDLPEQMSISPTFNVADLTE 180
           D V++ LRKER+P+G  NK K KK+GPCK++++VN NAYV D    ++I  TFNVADL  
Sbjct: 28  DEVIIFLRKERIPIGHSNKFKPKKYGPCKIIKEVNGNAYVADFSNWLNIFKTFNVADLLL 87

Query: 181 FIED 192
           F+ D
Sbjct: 88  FLSD 91


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score = 75.9 bits (185), Expect(2) = 3e-12
 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   DLVMVHLRKERVPVGTYNKLKMKKFGPCKVVRKVNDNAYVIDLPEQMSISPTFNVADLTE 180
           DLV VHLRK+R P    +KL  +  GP +V+ K+NDNAY I+LPE   +SPTFNVADLT 
Sbjct: 452 DLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNVADLTP 511

Query: 181 F--IEDEFFSR 207
           F  +ED   SR
Sbjct: 512 FFGLEDSESSR 522



 Score = 20.4 bits (41), Expect(2) = 3e-12
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 185 SRTSFFQEGEND 220
           SR++ FQEGE+D
Sbjct: 521 SRSTPFQEGEDD 532


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