BLASTX nr result

ID: Atractylodes21_contig00023842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023842
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15971.3| unnamed protein product [Vitis vinifera]              119   6e-25
ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246...   119   6e-25
ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containin...   115   8e-24
ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containin...   111   2e-22

>emb|CBI15971.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  119 bits (299), Expect = 6e-25
 Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3   GAQVLGRTIRVDHVTKYXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGAGCRFSHNEQR 182
           GAQ+LGR IRVDHV+ Y                  GVCRAFQRGEC RGAGC+FSH+EQR
Sbjct: 99  GAQILGRIIRVDHVSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQR 158

Query: 183 AANTGWGPQDAKNSRWENDKFEGPTRSEKGRGPSTQGRTRMHD----EDATSSRIEKQTE 350
           A+NTGWG +D K+SRW +DKF+G T+S+ GR P++    R+H+    E       + ++ 
Sbjct: 159 ASNTGWGSED-KSSRWGHDKFQGSTKSD-GR-PNSIPTNRVHEPTVGEGHRFGNKDARSS 215

Query: 351 TTSGDQDSSRSFDGRLKL-MKDEDVQGDGKKRARYDSEM 464
            T G +    S   R +L ++D+D +G  ++  + + E+
Sbjct: 216 RTKGSEGGRESHHRRSELDIRDQDGRGLERQMEQKEKEL 254


>ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
          Length = 429

 Score =  119 bits (299), Expect = 6e-25
 Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3   GAQVLGRTIRVDHVTKYXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGAGCRFSHNEQR 182
           GAQ+LGR IRVDHV+ Y                  GVCRAFQRGEC RGAGC+FSH+EQR
Sbjct: 99  GAQILGRIIRVDHVSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQR 158

Query: 183 AANTGWGPQDAKNSRWENDKFEGPTRSEKGRGPSTQGRTRMHD----EDATSSRIEKQTE 350
           A+NTGWG +D K+SRW +DKF+G T+S+ GR P++    R+H+    E       + ++ 
Sbjct: 159 ASNTGWGSED-KSSRWGHDKFQGSTKSD-GR-PNSIPTNRVHEPTVGEGHRFGNKDARSS 215

Query: 351 TTSGDQDSSRSFDGRLKL-MKDEDVQGDGKKRARYDSEM 464
            T G +    S   R +L ++D+D +G  ++  + + E+
Sbjct: 216 RTKGSEGGRESHHRRSELDIRDQDGRGLERQMEQKEKEL 254


>ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|222849793|gb|EEE87340.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  118 bits (296), Expect = 1e-24
 Identities = 68/151 (45%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
 Frame = +3

Query: 3   GAQVLGRTIRVDHVTKYXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGAGCRFSHNEQR 182
           GAQVLGR IRVDHVTKY                  GVC AFQRGEC RGAGCRFSH+EQR
Sbjct: 99  GAQVLGRIIRVDHVTKYKKKEEEDEETAQQKREARGVCHAFQRGECNRGAGCRFSHDEQR 158

Query: 183 AANTGWGPQDAKNSRWENDKFEGPTRSE-------------KGRGPSTQGRTRMHDEDAT 323
           AANTGWG QD K+SRW ++ F+GP +SE             K      + R+R HD++  
Sbjct: 159 AANTGWGAQD-KSSRWGHEMFDGPKKSEERSSYNMPSESHPKQNDRREEKRSRWHDDNEI 217

Query: 324 SSRIEKQTETTSGDQDSSRSFDGRLKLMKDE 416
              ++K  E      D +R  D +L+ ++D+
Sbjct: 218 ---VQKPRE------DYNRREDKKLRRLEDD 239


>ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
           [Cucumis sativus]
          Length = 395

 Score =  115 bits (289), Expect = 8e-24
 Identities = 66/155 (42%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
 Frame = +3

Query: 3   GAQVLGRTIRVDHVTKYXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGAGCRFSHNEQR 182
           GAQ+LGR +RVDHV+KY                  GVCRAFQRGECTRGAGC+FSH+EQR
Sbjct: 99  GAQILGRIVRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQR 158

Query: 183 AANTGWGPQDAKNSRWENDKFEGPTRSEK---GRGPSTQGRTRMHDEDATSSRIEKQTET 353
           AA+TGWG  +  +S+W +DKF+     +K    +G  T      H  + + S   +Q   
Sbjct: 159 AADTGWGAAEDASSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSGSL--RQENR 216

Query: 354 TSGDQDSSRSFDGRLKLMKDEDVQGDGKKRA-RYD 455
             G  DS  S     +L   ED  G  +KR+ RYD
Sbjct: 217 PRGWDDSKES-----ELKSREDHGGKDEKRSRRYD 246


>ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
           [Glycine max]
          Length = 354

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/126 (45%), Positives = 70/126 (55%)
 Frame = +3

Query: 3   GAQVLGRTIRVDHVTKYXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGAGCRFSHNEQR 182
           GAQVLGR IRVDHV KY                  GVCRAFQRGECTRGA C+FSH+EQR
Sbjct: 99  GAQVLGRIIRVDHVDKYKKKEEEDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQR 158

Query: 183 AANTGWGPQDAKNSRWENDKFEGPTRSEKGRGPSTQGRTRMHDEDATSSRIEKQTETTSG 362
           AANTGWG ++ K  +W +DKF+GP +  +     +       D D+ S       E  + 
Sbjct: 159 AANTGWGREEDK-PKWGHDKFDGPKKERRSGNNQSNHIAETRDRDSFSRARNNDAELDNQ 217

Query: 363 DQDSSR 380
            + S R
Sbjct: 218 PKRSDR 223


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