BLASTX nr result

ID: Atractylodes21_contig00023837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023837
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        177   1e-42
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   122   2e-26
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   122   3e-26
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]   122   4e-26
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]   117   7e-25

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/112 (73%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
 Frame = +2

Query: 71  SSFVGMIDVINNGLNEINSFAYFSCSLSLWHKRLAHTNVKNIEKMQNKGMLKMDEKNFEK 250
           SS +G  + I   LNEI S  Y +CS+SLWHKRLAHTN+KNIEKMQ KG+LK+++K+FEK
Sbjct: 466 SSSIGECNAIGFDLNEIMSSDYIACSISLWHKRLAHTNIKNIEKMQTKGLLKLNDKDFEK 525

Query: 251 CETCTKSKFTKKPFPSV-KRDTSILELVHSDICELNGILTRGGRRYFITFCD 403
           CETC KSKFTKKPFPSV KR+TS+LEL+HSDICELNG+LTRGG+RYFI+FCD
Sbjct: 526 CETCVKSKFTKKPFPSVPKRNTSLLELIHSDICELNGVLTRGGKRYFISFCD 577


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
 Frame = +2

Query: 50  GTFDSVNSSFVGMIDV-INNGLNEINSFAYFSC---SLSLWHKRLAHTNVKNIEKMQNKG 217
           G F     S  GMI +  N+ +N++ S + + C   SL LWH RLAH  +  I+++   G
Sbjct: 403 GNFVGKGYSCDGMIKLSTNDNINKMTSXSAYMCDSNSLXLWHNRLAHVGLSTIKRIVKCG 462

Query: 218 MLKMDEKNFEKCETCTKSKFTKKPFPSVKRDTSILELVHSDICELNGILTRGGRRYFITF 397
           ++  D K FEKCE C KSK  KKPF SV+R +++L+L HSD+CELNG+LTRGG RYF+TF
Sbjct: 463 LIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCELNGMLTRGGNRYFLTF 522

Query: 398 CD 403
            D
Sbjct: 523 ID 524


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
 Frame = +2

Query: 50  GTFDSVNSSFVGMIDV-INNGLNEINSFAYFSC---SLSLWHKRLAHTNVKNIEKMQNKG 217
           G F     S  GMI +  N+ +N++ S + + C   SL LWH RLAH  +  I+++   G
Sbjct: 403 GNFVGKGYSCDGMIKLSTNDNINKMTSTSAYMCDSNSLXLWHNRLAHVGLSTIKRIVKCG 462

Query: 218 MLKMDEKNFEKCETCTKSKFTKKPFPSVKRDTSILELVHSDICELNGILTRGGRRYFITF 397
           ++  D K FEKCE C KSK  KKPF SV+R +++L+L HSD+CELNG+LTRGG RYF+TF
Sbjct: 463 LIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCELNGMLTRGGNRYFLTF 522

Query: 398 CD 403
            D
Sbjct: 523 ID 524


>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 4/111 (3%)
 Frame = +2

Query: 83  GMIDV-INNGLNEINSFAYFSC---SLSLWHKRLAHTNVKNIEKMQNKGMLKMDEKNFEK 250
           GMI +  N+ +N++ S + + C   SL LWH RLAH  +  I+++   G++  D K FEK
Sbjct: 304 GMIKLSTNDNINKMTSTSAYMCDSNSLILWHNRLAHVGLSTIKRIVKCGLIACDTKKFEK 363

Query: 251 CETCTKSKFTKKPFPSVKRDTSILELVHSDICELNGILTRGGRRYFITFCD 403
           CE C KSK  KKPF SV+R +++L+L+HSD+CELNG+LTRGG RYF+TF D
Sbjct: 364 CEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLTRGGNRYFLTFID 414


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
 Frame = +2

Query: 50  GTFDSVNSSFVGMIDVI-NNGLNEINSFAYFSC---SLSLWHKRLAHTNVKNIEKMQNKG 217
           G F     S  GMI +  N+ + ++ S + + C   SL LWH RLAH  +  I+++   G
Sbjct: 381 GNFVGNGYSCDGMIKLCTNDNIIKMASTSAYMCDSNSLILWHNRLAHVGLSIIKRIVKCG 440

Query: 218 MLKMDEKNFEKCETCTKSKFTKKPFPSVKRDTSILELVHSDICELNGILTRGGRRYFITF 397
           ++  D K FEKCE C KSK  KKPF SV+R +++L+L+HSD+CELNG+LTRGG RYF+TF
Sbjct: 441 LIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCELNGMLTRGGNRYFLTF 500

Query: 398 CD 403
            D
Sbjct: 501 ID 502


Top