BLASTX nr result

ID: Atractylodes21_contig00023757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023757
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30062.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   169   2e-40
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   169   2e-40
ref|XP_002530100.1| U4/U6 small nuclear ribonucleoprotein Prp4, ...   166   1e-39
ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39

>emb|CBI30062.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/117 (68%), Positives = 94/117 (80%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           RPLSGCSFS+DGK LA C+L+G AKIWSMP++  VS+LKGHTERAT+V FSP  NH+ATA
Sbjct: 93  RPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATA 152

Query: 183 SADRTARLWNTEGTLLNTYKGHLDCLARVAFHPSGKYLGTTVXXXXXXXXXXKTWEE 353
           SADRTARLWN+EG+LL T++GHLD LAR+AFHPSGKYLGT            +T EE
Sbjct: 153 SADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEE 209



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           R + G SF  DG   A+C L    ++W +   + + +L+GH +    + FSP   H+AT 
Sbjct: 218 RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 277

Query: 183 SADRTARLWN-TEGTLLNTYKGHLDCLARVAFHPSGKYLGTT 305
           + D T R+W+  +   L     H + +++V F P   Y   T
Sbjct: 278 AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVT 319


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/117 (68%), Positives = 94/117 (80%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           RPLSGCSFS+DGK LA C+L+G AKIWSMP++  VS+LKGHTERAT+V FSP  NH+ATA
Sbjct: 285 RPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATA 344

Query: 183 SADRTARLWNTEGTLLNTYKGHLDCLARVAFHPSGKYLGTTVXXXXXXXXXXKTWEE 353
           SADRTARLWN+EG+LL T++GHLD LAR+AFHPSGKYLGT            +T EE
Sbjct: 345 SADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEE 401



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           R + G SF  DG   A+C L    ++W +   + + +L+GH +    + FSP   H+AT 
Sbjct: 410 RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 469

Query: 183 SADRTARLWN-TEGTLLNTYKGHLDCLARVAFHPSGKYLGTT 305
           + D T R+W+  +   L     H + +++V F P   Y   T
Sbjct: 470 AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVT 511


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/117 (68%), Positives = 94/117 (80%)
 Frame = +3

Query: 3    RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
            RPLSGCSFS+DGK LA C+L+G AKIWSMP++  VS+LKGHTERAT+V FSP  NH+ATA
Sbjct: 796  RPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATA 855

Query: 183  SADRTARLWNTEGTLLNTYKGHLDCLARVAFHPSGKYLGTTVXXXXXXXXXXKTWEE 353
            SADRTARLWN+EG+LL T++GHLD LAR+AFHPSGKYLGT            +T EE
Sbjct: 856  SADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEE 912



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3    RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
            R + G SF  DG   A+C L    ++W +   + + +L+GH +    + FSP   H+AT 
Sbjct: 921  RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 980

Query: 183  SADRTARLWN-TEGTLLNTYKGHLDCLARVAFHPSGKYLGTT 305
            + D T R+W+  +   L     H + +++V F P   Y   T
Sbjct: 981  AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVT 1022


>ref|XP_002530100.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus
           communis] gi|223530411|gb|EEF32299.1| U4/U6 small
           nuclear ribonucleoprotein Prp4, putative [Ricinus
           communis]
          Length = 541

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/102 (75%), Positives = 91/102 (89%), Gaps = 1/102 (0%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPT-NNHIAT 179
           RPLSGCSFS DG+ LATC+LTG AKIWSMP+++ VS+LKGHTERAT++ FSP  NNH+AT
Sbjct: 250 RPLSGCSFSNDGQLLATCALTGVAKIWSMPQVRKVSTLKGHTERATDIVFSPVHNNHLAT 309

Query: 180 ASADRTARLWNTEGTLLNTYKGHLDCLARVAFHPSGKYLGTT 305
           ASADRTA+LWNT+G +L T+ GHLD LAR+AFHPSGKYLGTT
Sbjct: 310 ASADRTAKLWNTDGLVLGTFHGHLDRLARIAFHPSGKYLGTT 351



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           R + G +F +DG    +C L   A++W +   + V +L+GH +    ++FSP   H+AT 
Sbjct: 376 RSVYGLAFHHDGSLAGSCGLDALARVWDLRTGRSVLALEGHVKPVLGISFSPNGYHLATG 435

Query: 183 SADRTARLWN-TEGTLLNTYKGHLDCLARVAFHPSGKY 293
             D T R+W+  +   L     H + +++V F P   Y
Sbjct: 436 GEDNTCRIWDLRKKKSLYIIPAHSNLISQVKFEPQEGY 473


>ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|222854895|gb|EEE92442.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/101 (76%), Positives = 90/101 (89%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           RPLSGCSFS DG+ LATCSL+G AKIWS+P++  VS+LKGH ERAT+V FSP +NH+ATA
Sbjct: 257 RPLSGCSFSCDGEMLATCSLSGVAKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATA 316

Query: 183 SADRTARLWNTEGTLLNTYKGHLDCLARVAFHPSGKYLGTT 305
           SADRTARLWNT+G+LL  ++GHLD LARVAFHPSGKYLGTT
Sbjct: 317 SADRTARLWNTDGSLLMKFEGHLDRLARVAFHPSGKYLGTT 357



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3   RPLSGCSFSYDGKFLATCSLTGAAKIWSMPEIKIVSSLKGHTERATNVTFSPTNNHIATA 182
           R + G +F +DG   A+C L   A++W +   + + + +GH +    ++FSP   H+AT 
Sbjct: 382 RSIYGIAFHHDGSLAASCGLDALARVWDLRTGRSIMAFEGHVKPLLGISFSPNGYHLATG 441

Query: 183 SADRTARLWN-TEGTLLNTYKGHLDCLARVAFHP-SGKYLGTT 305
             D T R+W+  +   L     H + +++V F P  G YL T+
Sbjct: 442 GEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYYLVTS 484


Top