BLASTX nr result

ID: Atractylodes21_contig00023728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023728
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   211   2e-52
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   210   5e-52
ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   209   9e-52
ref|XP_002526239.1| DNA binding protein, putative [Ricinus commu...   202   1e-49
ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-contain...   201   2e-49

>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
           [Cucumis sativus]
          Length = 342

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/191 (54%), Positives = 130/191 (68%), Gaps = 19/191 (9%)
 Frame = -1

Query: 805 SSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDRDISCDDP 626
           +S RV+P VG FT+QCA CFKWRL+P KE+YE IREH+ E+PFYCET R W  DISCDDP
Sbjct: 98  NSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDP 157

Query: 625 TDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLRSIPEVQG 446
            DI QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G KLRS+ ++Q 
Sbjct: 158 ADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQK 217

Query: 445 YLMTHPEH-GQGVSPAHFSFKVPRRLRD-----RKPPKS------------VEPIMWAGP 320
           YL+ HPE+  +GVS   FSF++P+ LR+     R+P  +            V PI WA P
Sbjct: 218 YLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARP 277

Query: 319 EDNN-LQLAEP 290
           +D+  LQL +P
Sbjct: 278 DDSTALQLGKP 288


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
           gi|222873656|gb|EEF10787.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 343

 Score =  210 bits (534), Expect = 5e-52
 Identities = 102/195 (52%), Positives = 130/195 (66%), Gaps = 19/195 (9%)
 Frame = -1

Query: 817 FSRHSS----KRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWD 650
           F R+S      RV+P VG FT+QCAKCFKWRL+P K++YE +REHI E+PF+CET R+W 
Sbjct: 91  FRRYSDLNVPSRVLPSVGAFTVQCAKCFKWRLIPTKQKYEELREHILEEPFFCETAREWR 150

Query: 649 RDISCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKL 470
            DISCDDPTDI+QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G +L
Sbjct: 151 PDISCDDPTDIDQDGSRLWAIDKPNIAQPPPGWQRLLRIRGEGSTKFADVYYQAPSGKRL 210

Query: 469 RSIPEVQGYLMTHPEH-GQGVSPAHFSFKVPRRL-----RDRKP--------PKSVEPIM 332
           RS+ E+Q YL+ HPE+   G++   FSF++P+ L     R ++P        P    P+ 
Sbjct: 211 RSMVEIQKYLIEHPEYMRDGITLTQFSFQIPKPLQENYVRKKRPRLSASCLEPGEANPLK 270

Query: 331 WAGPED-NNLQLAEP 290
           W GP D   LQL  P
Sbjct: 271 WVGPGDCTELQLGRP 285


>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
           vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score =  209 bits (532), Expect = 9e-52
 Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
 Frame = -1

Query: 823 PSFSRHSS----KRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQ 656
           PSF+ +S+     RV+P VG FT+QCA CFKWRL+P KE+YE IREHI EQPF CET R+
Sbjct: 89  PSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEEIREHILEQPFVCETARE 148

Query: 655 WDRDISCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGT 476
           W  ++SCDDP DI QDG+R+WAIDKPNIAQPP GW            KFADVYY++P+G 
Sbjct: 149 WRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRGEGSTKFADVYYVAPSGK 208

Query: 475 KLRSIPEVQGYLMTHPEH-GQGVSPAHFSFKVPRRLRD---RKPPKSVEPIMWAGPEDNN 308
           +LRS+ EVQ YL+ HPE+   GV+ + FSF++P+ L++   RK P  V     AG  D+ 
Sbjct: 209 RLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRKRPARVN----AGSYDDT 264

Query: 307 LQL----------AEPLSWAGPAE 266
                          PLSWAGPAE
Sbjct: 265 TSSGMSRPLEPGEVNPLSWAGPAE 288


>ref|XP_002526239.1| DNA binding protein, putative [Ricinus communis]
           gi|223534433|gb|EEF36136.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 271

 Score =  202 bits (513), Expect = 1e-49
 Identities = 98/164 (59%), Positives = 119/164 (72%), Gaps = 4/164 (2%)
 Frame = -1

Query: 832 AATPSFSRHSSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQW 653
           A  P F  HS  RV+P VG FT+QCAKCFKWRL+P KE+YE IREHI EQPFYCET R+W
Sbjct: 91  ARRPGFLMHS--RVLPSVGAFTVQCAKCFKWRLIPTKEKYEEIREHILEQPFYCETAREW 148

Query: 652 DRDISCDDPTDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTK 473
             DISC+DP DI QDG+R+WAIDKPNIAQPP GW            KFADVYY +P+G +
Sbjct: 149 RPDISCNDPADISQDGSRLWAIDKPNIAQPPRGWQRLLRIRGEGSSKFADVYYQAPSGKR 208

Query: 472 LRSIPEVQGYLMTHPEHGQ-GVSPAHFSFKVPRRLRD---RKPP 353
           LRS+ E++ YLM +PE+ Q GV  + FSF++PR L++   RK P
Sbjct: 209 LRSMVEIERYLMANPEYVQNGVKLSQFSFQIPRPLQENYVRKRP 252


>ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like,
           partial [Cucumis sativus]
          Length = 268

 Score =  201 bits (512), Expect = 2e-49
 Identities = 91/148 (61%), Positives = 112/148 (75%), Gaps = 1/148 (0%)
 Frame = -1

Query: 805 SSKRVVPKVGGFTIQCAKCFKWRLVPDKERYEAIREHIAEQPFYCETTRQWDRDISCDDP 626
           +S RV+P VG FT+QCA CFKWRL+P KE+YE IREH+ E+PFYCET R W  DISCDDP
Sbjct: 98  NSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDP 157

Query: 625 TDIEQDGTRIWAIDKPNIAQPPPGWXXXXXXXXXXXXKFADVYYISPTGTKLRSIPEVQG 446
            DI QDG+R+WAIDKPNIAQPPPGW            KFADVYY +P+G KLRS+ ++Q 
Sbjct: 158 ADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQK 217

Query: 445 YLMTHPEH-GQGVSPAHFSFKVPRRLRD 365
           YL+ HPE+  +GVS   FSF++P+ LR+
Sbjct: 218 YLIEHPEYQTEGVSMTRFSFQIPKPLRE 245


Top