BLASTX nr result

ID: Atractylodes21_contig00023706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023706
         (1839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   462   e-127
emb|CBI32027.3| unnamed protein product [Vitis vinifera]              460   e-127
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig...   444   e-122
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi...   444   e-122

>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  462 bits (1189), Expect = e-127
 Identities = 230/398 (57%), Positives = 286/398 (71%), Gaps = 19/398 (4%)
 Frame = +2

Query: 242  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-----CGGA 406
            ME  ER K  E   E+WSWGAGT+GQLGT +L+DEH+PQ                 CGGA
Sbjct: 1    MEENERDKGGEV--EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGA 58

Query: 407  HVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNITHVSAGWNHSGFVTES 586
            HV+ALT    V+TWGRGTSGQLGHG +V+SL+PK V +L++F +THVSAGW+HSGFV+++
Sbjct: 59   HVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDT 118

Query: 587  GHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYG 766
            G L+TCGDGSFGQLG GD +S   P+KVS F+ +HV+QIACGMRHSL L+K   GDQVYG
Sbjct: 119  GCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQVYG 175

Query: 767  FGSGKRGQLGISNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGNLYTWGRGFS 946
            FGSGKRGQLG+S +  +SIS+PQ+  GLE V + SI ANGDHSAALSA+G+LYTWGRGF 
Sbjct: 176  FGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFG 235

Query: 947  GSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLAK----- 1111
             + DV CP  + S + F Q  LGWNH LVLT  GEV MLGG+ HGVL  PQ  ++     
Sbjct: 236  STSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLS 295

Query: 1112 ---------QDSKEAHVEKIPGLNGIKVVGVASGAEHSVLTTENGVVMTWGWGEHGQLGL 1264
                     ++S+E ++EK+ GL+G+ VV +A+GAEHS L TEN V+ TWGWGEHGQLGL
Sbjct: 296  VIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGL 355

Query: 1265 GSTSDQTCPQVVSIGENVAHEQMTSKVYCGSGFTFVVR 1378
            G+T DQ  PQ V +G  +  +    KVYCGSGFTF ++
Sbjct: 356  GNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAIK 393


>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  460 bits (1183), Expect = e-127
 Identities = 230/396 (58%), Positives = 288/396 (72%), Gaps = 13/396 (3%)
 Frame = +2

Query: 230  SRSKMEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX----- 394
            + + ME  ER K  E   E+WSWGAGT+GQLGT +L+DEH+PQ                 
Sbjct: 5    TNTMMEENERDKGGEV--EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLA 62

Query: 395  CGGAHVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNITHVSAGWNHSGF 574
            CGGAHV+ALT    V+TWGRGTSGQLGHG +V+SL+PK V +L++F +THVSAGW+HSGF
Sbjct: 63   CGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGF 122

Query: 575  VTESGHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGE--R 748
            V+++G L+TCGDGSFGQLG GD +S   P+KVS F+ +HV+QIACGMRHSL L+KG    
Sbjct: 123  VSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLS 182

Query: 749  GDQVYGFGSGKRGQLGISNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGNLYT 928
            GDQVYGFGSGKRGQLG+S +  +SIS+PQ+  GLE V + SI ANGDHSAALSA+G+LYT
Sbjct: 183  GDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYT 242

Query: 929  WGRGFSGSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLA 1108
            WGRGF  + DV CP  + S + F Q  LGWNH LVLT  GEV MLGG+ HGVL  PQ  +
Sbjct: 243  WGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGS 302

Query: 1109 K-----QDSKEAHVEKIPGLNGIKVVGVASGAEHSVLTTEN-GVVMTWGWGEHGQLGLGS 1270
            +     ++S+E ++EK+ GL+G+ VV +A+GAEHS L T N  V+ TWGWGEHGQLGLG+
Sbjct: 303  QVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTGNILVIKTWGWGEHGQLGLGN 362

Query: 1271 TSDQTCPQVVSIGENVAHEQMTSKVYCGSGFTFVVR 1378
            T DQ  PQ V +G  +  +    KVYCGSGFTF ++
Sbjct: 363  TYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAIK 398


>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  451 bits (1161), Expect = e-124
 Identities = 223/390 (57%), Positives = 285/390 (73%), Gaps = 10/390 (2%)
 Frame = +2

Query: 242  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-----CGGA 406
            ME  +R ++  ++Q++WSWGAGTEGQLGTGKL+DE++PQ                 CGGA
Sbjct: 1    MEEAKRDEEESKQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGA 60

Query: 407  HVVALTPGKMVLTWGRGTSGQLGHGHLVNSLEPKPVDVLKNFNITHVSAGWNHSGFVTES 586
            HV+ALT G  V TWGRGT+GQLGHG ++NSL PKPV  L++  ITHVSAGW+HSGFV++ 
Sbjct: 61   HVIALTSGGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGFVSDI 120

Query: 587  GHLYTCGDGSFGQLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYG 766
            G L+TCGDGSFGQLG G+YRSQS P+KV  F    V QIACGMRHSL L+    G+QVYG
Sbjct: 121  GLLFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLL---NGNQVYG 177

Query: 767  FGSGKRGQLGISNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGNLYTWGRGFS 946
            FGSGKRGQLGIS +K KSI+LPQ   GLE+V + SI+ANGDHSAA+SADG+LYTWGRGF+
Sbjct: 178  FGSGKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFA 237

Query: 947  GSPDVCCPNRVISPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLA-----K 1111
            G+ D   P   +S +   +A LGWNH L+LT + EVLMLGG++HGVL   + ++      
Sbjct: 238  GASDANFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRP 297

Query: 1112 QDSKEAHVEKIPGLNGIKVVGVASGAEHSVLTTENGVVMTWGWGEHGQLGLGSTSDQTCP 1291
            +DS    + ++ GL+G+KVV +A+GAEHS L        TWGWGEHGQLGLG+T+DQT P
Sbjct: 298  EDSPGTALNEVIGLDGVKVVKIAAGAEHSAL--------TWGWGEHGQLGLGNTNDQTIP 349

Query: 1292 QVVSIGENVAHEQMTSKVYCGSGFTFVVRT 1381
            Q VS+  ++ +++ +  VYCGSGFTF +R+
Sbjct: 350  QTVSLIPDIQNKEASLNVYCGSGFTFAIRS 379


>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
            max]
          Length = 388

 Score =  444 bits (1143), Expect = e-122
 Identities = 218/375 (58%), Positives = 275/375 (73%), Gaps = 7/375 (1%)
 Frame = +2

Query: 272  EEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX--CGGAHVVALTPGKMVLT 445
            E +Q VWSWGAGTEGQLGT  LQDEH PQ              CGGAHV+ALT    VL+
Sbjct: 15   ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLS 74

Query: 446  WGRGTSGQLGHGHLV-NSLEPKPVDVLKNFNITHVSAGWNHSGFVTESGHLYTCGDGSFG 622
            WGRG SGQLGHG +V NSL PK V  L  + ITHVSAGW HSGFV+++G ++TCGDGSFG
Sbjct: 75   WGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134

Query: 623  QLGLGDYRSQSCPIKVSCFEFRHVEQIACGMRHSLALMKGERGDQVYGFGSGKRGQLGIS 802
            QLG GD+ S   P+KVSCF  +HVEQ+ACGMRHSL L+KG   +QVYGFGSGKRGQLG+S
Sbjct: 135  QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKG---NQVYGFGSGKRGQLGVS 191

Query: 803  NEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADGNLYTWGRGFSGSPDVCCPNRVI 982
            N+++KS+++P+ VSG E V ++ I ANGDHSAA+S DG++YTWGRGF G  D   P  + 
Sbjct: 192  NDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLN 251

Query: 983  SPVSFMQATLGWNHALVLTDEGEVLMLGGSHHGVLNKPQNLAKQDS----KEAHVEKIPG 1150
            S ++F +  LGWNHAL ++ EGEV MLGG+H GVL+  QN++        +E ++EK+PG
Sbjct: 252  SSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG 311

Query: 1151 LNGIKVVGVASGAEHSVLTTENGVVMTWGWGEHGQLGLGSTSDQTCPQVVSIGENVAHEQ 1330
            L+G K+  +A+GAEHSV+ TE+G + TWGWGEHGQLGLG T D+  P  VS+G ++ +E 
Sbjct: 312  LDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDL-NEA 370

Query: 1331 MTSKVYCGSGFTFVV 1375
             +  V+CGSGFTF V
Sbjct: 371  ASVIVFCGSGFTFAV 385



 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
 Frame = +2

Query: 737  KGERGDQVYGFGSGKRGQLGISNEKIKSISLPQSVSGLEEVNVSSITANGDHSAALSADG 916
            K E   +V+ +G+G  GQLG   + ++    PQ +      ++SS+   G H  AL++ G
Sbjct: 13   KDESEQRVWSWGAGTEGQLG--TKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAG 70

Query: 917  NLYTWGRGFSGS-------PDVCCPNRVISPVSFM--QATLGWNHALVLTDEGEVLMLGG 1069
             + +WGRG SG         +   P  V S   +     + GW H+  ++D G V   G 
Sbjct: 71   KVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGD 130

Query: 1070 SHHGVLNKPQNLAKQDSKEAHVEKIPGLNGIKVVGVASGAEHSVLTTENGVVMTWGWGEH 1249
               G L    +     +      K+       V  VA G  HS++  +   V  +G G+ 
Sbjct: 131  GSFGQLGHGDH-----ASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKR 185

Query: 1250 GQLGLGS--TSDQTCPQVVSIGENV 1318
            GQLG+ +        P+VVS  E V
Sbjct: 186  GQLGVSNDRVKSVNVPKVVSGFEGV 210


>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
            gi|355514908|gb|AES96531.1| RCC1 and BTB
            domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  444 bits (1143), Expect = e-122
 Identities = 231/416 (55%), Positives = 284/416 (68%), Gaps = 38/416 (9%)
 Frame = +2

Query: 242  MEAMERVKDTEEKQEVWSWGAGTEGQLGTGKLQDEHIPQXXXXXXXXXXXX-CGGAHVVA 418
            ME  E+VK  E+ + +WSWGAGT+GQLGTG+LQDE IPQ             CGGAHV+A
Sbjct: 198  MEESEQVKIEEKIERLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSVSSLACGGAHVIA 257

Query: 419  LTPGKM--------------------------------VLTWGRGTSGQLGHGHLVNSL- 499
            LT  +M                                VL+WGRG SGQLGHG +VN+L 
Sbjct: 258  LTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNLL 317

Query: 500  EPKPVDVLKNFNITHVSAGWNHSGFVTESGHLYTCGDGSFGQLGLGDYRSQSCPIKVSCF 679
             PK +  L N+ ITHVSAGW HSGFV++SG L+TCGDGSFGQLG GDY S S PIKVS F
Sbjct: 318  YPKAITSLDNYFITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKVSSF 377

Query: 680  EFRHVEQIACGMRHSLALMKGERGDQVYGFGSGKRGQLGISNEKIKSISLPQSVSGLEEV 859
              ++V Q+ACGMRHSL L+KG   +QVYGFGSGKRGQLG+S +KIKSI+LP+ +SG E+ 
Sbjct: 378  VDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGFEDE 437

Query: 860  NVSSITANGDHSAALSADGNLYTWGRGFSGSPDVCCPNRVISPVSFMQATLGWNHALVLT 1039
             +  I+ANGDHSAALS DG+LYTWGRGF G  D   P  + S   F + TLGWNHAL +T
Sbjct: 438  EIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMT 497

Query: 1040 DEGEVLMLGGSHHGVLNKPQNL--AKQ--DSKEAHVEKIPGLNGIKVVGVASGAEHSVLT 1207
             EG+V MLGG+H GVL+   N   AK   DS+EA++EK PGL+G K+  +A+GAEHSVL 
Sbjct: 498  GEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLV 557

Query: 1208 TENGVVMTWGWGEHGQLGLGSTSDQTCPQVVSIGENVAHEQMTSKVYCGSGFTFVV 1375
            TENG + TWGWGEHGQLGLG   D+  P  V++G ++ +E  + +VYCGSGFTF +
Sbjct: 558  TENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDL-NEAASIRVYCGSGFTFAL 612


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