BLASTX nr result

ID: Atractylodes21_contig00023697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023697
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   148   5e-34
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   136   2e-30
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29

>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/93 (76%), Positives = 83/93 (89%)
 Frame = -2

Query: 281 LGLGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVS 102
           L  G+EPNGFTLS+VIKACSE+G++ LG+ FHGVV RRGFD+N VI SSL+DMYGRN VS
Sbjct: 154 LDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVS 213

Query: 101 CDARKLFDELLEPDSICWTSVISAFTRNDLFEE 3
            DAR+LFDELLEPD +CWT+VISAFTRNDL+EE
Sbjct: 214 SDARQLFDELLEPDPVCWTTVISAFTRNDLYEE 246



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 49/87 (56%)
 Frame = -2

Query: 263 PNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVSCDARKL 84
           P+ +T  SV+ AC  LG +  G   H  V   GF  N V  SSLVDMYG+      +++L
Sbjct: 262 PDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRL 321

Query: 83  FDELLEPDSICWTSVISAFTRNDLFEE 3
           FD +   +S+ W+++++ +  N  +E+
Sbjct: 322 FDRMSNRNSVSWSALLAVYCHNGDYEK 348


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/93 (74%), Positives = 81/93 (87%)
 Frame = -2

Query: 281 LGLGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVS 102
           L  GVEPN FTLS+VIKACSELGD+ LGR+FHGVV  RGFD+N+VIAS+L+DM+GRN   
Sbjct: 153 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 212

Query: 101 CDARKLFDELLEPDSICWTSVISAFTRNDLFEE 3
            DAR+LFDELLEPD+ICWTS+ISA TRND F+E
Sbjct: 213 DDARQLFDELLEPDAICWTSIISALTRNDFFDE 245



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/89 (34%), Positives = 54/89 (60%)
 Frame = -2

Query: 272 GVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVSCDA 93
           G+ P+GFT  +V+ AC  LG +  G+  H  V   GF  N V+ SSLVDMYG+     ++
Sbjct: 258 GMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGES 317

Query: 92  RKLFDELLEPDSICWTSVISAFTRNDLFE 6
           +++FD +   +S+ W++++  + +N  F+
Sbjct: 318 QRIFDRMPIKNSVSWSALLGGYCQNGDFK 346


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/93 (74%), Positives = 81/93 (87%)
 Frame = -2

Query: 281 LGLGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVS 102
           L  GVEPN FTLS+VIKACSELGD+ LGR+FHGVV  RGFD+N+VIAS+L+DM+GRN   
Sbjct: 212 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 271

Query: 101 CDARKLFDELLEPDSICWTSVISAFTRNDLFEE 3
            DAR+LFDELLEPD+ICWTS+ISA TRND F+E
Sbjct: 272 DDARQLFDELLEPDAICWTSIISALTRNDFFDE 304



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/89 (34%), Positives = 54/89 (60%)
 Frame = -2

Query: 272 GVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVSCDA 93
           G+ P+GFT  +V+ AC  LG +  G+  H  V   GF  N V+ SSLVDMYG+     ++
Sbjct: 317 GMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGES 376

Query: 92  RKLFDELLEPDSICWTSVISAFTRNDLFE 6
           +++FD +   +S+ W++++  + +N  F+
Sbjct: 377 QRIFDRMPIKNSVSWSALLGGYCQNGDFK 405


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/93 (65%), Positives = 80/93 (86%)
 Frame = -2

Query: 281 LGLGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVS 102
           L +GV+PN FTLS+VIKAC++LG + LG+ FH V+  RGF +NHVI S+L+D+YGRNY  
Sbjct: 145 LDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYEL 204

Query: 101 CDARKLFDELLEPDSICWTSVISAFTRNDLFEE 3
            DAR+LFDELLEPD+ICWTSVISA+TRND++++
Sbjct: 205 DDARRLFDELLEPDAICWTSVISAYTRNDMYDK 237



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/90 (35%), Positives = 55/90 (61%)
 Frame = -2

Query: 275 LGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVSCD 96
           LG+ P+GFT  +V+ AC  L  +  G+  H  +   GF  N V+ SSLVDMYG+  +  +
Sbjct: 249 LGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDE 308

Query: 95  ARKLFDELLEPDSICWTSVISAFTRNDLFE 6
           ++++FD +   +S+ W++++  F +N  FE
Sbjct: 309 SQRVFDRMSVKNSVSWSALLGGFCQNGDFE 338


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/93 (66%), Positives = 78/93 (83%)
 Frame = -2

Query: 281 LGLGVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVS 102
           LGLG+EPNGFTLS+VIKACS LGD+ LG+ FHGVV  RGFD N VI+++L+DMYGRN   
Sbjct: 154 LGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAV 213

Query: 101 CDARKLFDELLEPDSICWTSVISAFTRNDLFEE 3
            DA  +F EL +PD+ICWTS+ISAFTRND++++
Sbjct: 214 DDAILVFVELPQPDAICWTSIISAFTRNDVYDK 246



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/89 (33%), Positives = 50/89 (56%)
 Frame = -2

Query: 272 GVEPNGFTLSSVIKACSELGDVNLGRVFHGVVFRRGFDTNHVIASSLVDMYGRNYVSCDA 93
           G+ P+GFT  +V+ AC  LG +  G+  H  V   G   N  + SSLVDMYG+  +   +
Sbjct: 259 GLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQS 318

Query: 92  RKLFDELLEPDSICWTSVISAFTRNDLFE 6
           + +FD +   + + WT+++  + +N  FE
Sbjct: 319 QCVFDRMSVKNLVSWTALLGGYCQNGDFE 347


Top