BLASTX nr result

ID: Atractylodes21_contig00023656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023656
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_003596877.1| Pentatricopeptide repeat-containing protein ...    59   8e-07
ref|XP_003626823.1| Pentatricopeptide repeat-containing protein ...    57   2e-06
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...    57   2e-06

>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 313

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/50 (72%), Positives = 45/50 (90%)
 Frame = -1

Query: 582 RVEEAETVVEGMDAIPDEALWGALLAACKTYGKVEVAERLADKIYARRVN 433
           RVEEAE ++EGM+  PDEALWGALLA+CK +GKVEVAER+A+K+Y RR+N
Sbjct: 260 RVEEAEELIEGMEVEPDEALWGALLASCKIHGKVEVAERVAEKVYGRRLN 309


>ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 315

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = -1

Query: 582 RVEEAETVVEGMDAIPDEALWGALLAACKTYGKVEVAERLADKIYARRVNF 430
           +VEEAE ++  M+  PDEALWGALL ACKT+GK+EV ER+ +++Y R ++F
Sbjct: 261 QVEEAEKLILRMEVKPDEALWGALLGACKTHGKLEVTERVEERVYGRELSF 311


>ref|XP_003596877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240912|gb|ABD32770.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485925|gb|AES67128.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = -1

Query: 579 VEEAETVVEGMDAIPDEALWGALLAACKTYGKVEVAERLADKIYARRVN 433
           VEEAE +   MD  PDEAL GAL  ACKT+G+V+VAER+A+K Y   ++
Sbjct: 262 VEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAEKFYGTELS 310


>ref|XP_003626823.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520845|gb|AET01299.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 355

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -1

Query: 579 VEEAETVVEGMDAIPDEALWGALLAACKTYGKVEVAERLADKIYARRVN 433
           VEEAE +   MD  PDEAL GAL  ACKT+G+V+VAER+A++ Y   ++
Sbjct: 262 VEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERFYGTELS 310


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -1

Query: 579 VEEAETVVEGMDAIPDEALWGALLAACKTYGKVEVAERLADKIYARRVN 433
           VEEAE +   MD  PDEAL GAL  ACKT+G+V+VAER+A++ Y   ++
Sbjct: 262 VEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERFYGTELS 310


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