BLASTX nr result

ID: Atractylodes21_contig00023627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023627
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...   337   1e-90
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   318   7e-85
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop...   317   2e-84
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu...   309   3e-82
ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814...   306   3e-81

>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score =  337 bits (864), Expect = 1e-90
 Identities = 162/195 (83%), Positives = 174/195 (89%)
 Frame = +1

Query: 52  NGSKLNSVFYAQNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 231
           +GS+ N+VFYA++YHPIQAGSIDGTD LPHDNAVYRALLCSSAGLYDP GDP VIG+ PY
Sbjct: 2   SGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGD-PY 60

Query: 232 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 411
           CTVFVGHL+  TTEDTLHKAMSK+G VK+LRLVRHIVTGAS+GYAFVEYE+EREMRRAYE
Sbjct: 61  CTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYE 120

Query: 412 KAHHSIIDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXESGQLRFGGRERPFRAPLRPIP 591
            AHHS+IDD EIIVDYNRQQLMPGWIP           ESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 592 LDDLKRLGIPPPPEG 636
           LDDLKRLGIPPPPEG
Sbjct: 181 LDDLKRLGIPPPPEG 195


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  318 bits (814), Expect = 7e-85
 Identities = 155/195 (79%), Positives = 163/195 (83%)
 Frame = +1

Query: 52  NGSKLNSVFYAQNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 231
           +G  +NSVFYA  YHPIQAGSIDGTD  PHDNAVYRALLCSSAGLYDP GDP  IG+ PY
Sbjct: 2   SGRSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGD-PY 60

Query: 232 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 411
           CT+FVG LS  TTEDTL KAMSKYG VKNLRLVRHIVTGASRGYAFVE+E+EREMRRAY+
Sbjct: 61  CTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYK 120

Query: 412 KAHHSIIDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXESGQLRFGGRERPFRAPLRPIP 591
              HS IDDSEIIVDYNRQQLMPGWIP           ESGQLRFGGRERPFRAPL+ IP
Sbjct: 121 DGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTIP 180

Query: 592 LDDLKRLGIPPPPEG 636
            DDLKRLGIPPPPEG
Sbjct: 181 YDDLKRLGIPPPPEG 195


>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
           protein-like [Cucumis sativus]
           gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
           small nuclear ribonucleoprotein 35 kDa protein-like
           [Cucumis sativus]
          Length = 333

 Score =  317 bits (811), Expect = 2e-84
 Identities = 154/195 (78%), Positives = 166/195 (85%)
 Frame = +1

Query: 52  NGSKLNSVFYAQNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 231
           +GS +N VFYA NYHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDP GDP V G+ PY
Sbjct: 2   SGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGD-PY 60

Query: 232 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 411
           CT+FVG LS  TTEDTL +AMSKYG VKNLRLVRHIVTG+SRGYAFVEYE+E+EM+RAY+
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 120

Query: 412 KAHHSIIDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXESGQLRFGGRERPFRAPLRPIP 591
            AHHS+IDD EIIVDYNRQ+LM GWIP           ESGQLRFGGRERPFRAPLRPIP
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIP 180

Query: 592 LDDLKRLGIPPPPEG 636
            DDLKRLGI PPPEG
Sbjct: 181 YDDLKRLGITPPPEG 195


>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
           communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
           ribonucleoprotein 70 kD, putative [Ricinus communis]
          Length = 389

 Score =  309 bits (791), Expect = 3e-82
 Identities = 151/193 (78%), Positives = 165/193 (85%)
 Frame = +1

Query: 58  SKLNSVFYAQNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPYCT 237
           +K+NSVFYA++YHPIQAGSIDGTDILPHDNA+YRA LC SAGLYDPLGDP VIG+ P+CT
Sbjct: 4   TKVNSVFYAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGD-PFCT 62

Query: 238 VFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYEKA 417
           +FVG LS  TTE+TL KAMSKYG V+NLRLVR IVTGASRGYAFVEY +EREMRRAY  A
Sbjct: 63  LFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFVEYGTEREMRRAYMDA 122

Query: 418 HHSIIDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXESGQLRFGGRERPFRAPLRPIPLD 597
           HHS IDDSEIIVDYNRQQLMPGWIP           ESGQLRFGGRERPFRAPL+ +P D
Sbjct: 123 HHSFIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQSVPFD 182

Query: 598 DLKRLGIPPPPEG 636
           +LKRLGI PPPEG
Sbjct: 183 ELKRLGISPPPEG 195


>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
          Length = 347

 Score =  306 bits (783), Expect = 3e-81
 Identities = 147/191 (76%), Positives = 160/191 (83%)
 Frame = +1

Query: 64  LNSVFYAQNYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPYCTVF 243
           LNSVFYA +YHPIQAGSIDGTD++PHDNAVYRA LCSS GLYDP GDP   G+ PYCT+F
Sbjct: 8   LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGD-PYCTLF 66

Query: 244 VGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYEKAHH 423
           V  LS+ TTED L K MSKYG VKNLRLVR IVTGASRGYAFVEYE+EREMRRAY  AHH
Sbjct: 67  VARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHH 126

Query: 424 SIIDDSEIIVDYNRQQLMPGWIPXXXXXXXXXXXESGQLRFGGRERPFRAPLRPIPLDDL 603
            I+DDSEIIVDYNRQQLMPGWIP           ESGQLRFGGRE+PFRAPL+PIP ++L
Sbjct: 127 LIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPYEEL 186

Query: 604 KRLGIPPPPEG 636
           K+LGIPPPPEG
Sbjct: 187 KKLGIPPPPEG 197


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